DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt1

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_017947750.1 Gene:syt1 / 100037879 XenbaseID:XB-GENE-5752629 Length:425 Species:Xenopus tropicalis


Alignment Length:323 Identity:128/323 - (39%)
Similarity:197/323 - (60%) Gaps:46/323 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DDHS---LTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPC--KGGSSGTGDIPT 220
            ||.:   ||:|::.....:..|||.:.:.|.|..:.|.|||.||:...||.  .||:|       
 Frog   124 DDDAETGLTDGEDKEQPKEVEKLGKLQYSLDYDFQNNQLMVGIIQAAELPALDMGGTS------- 181

  Fly   221 GMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTF---YGLNMNDLQNMSLHFVI 282
                      ||||||.|:|||:.|.:|:|.|.|.|||::|.|||   |.    :|...:|...:
 Frog   182 ----------DPYVKLFLMPDKKKKFETKVHRKTLNPVFNEQFTFKVPYA----ELGGKTLVLTV 232

  Fly   283 LSFDRYSRDDVIGEVVCPLTSIEIGDISKE---ALSISKEIQPRSLKIRAQGRGELLISLCWQPA 344
            ..|||:|:.||||:|..|:.:::.|.:::|   .:|..||.|.:        .|::..||.:.|.
 Frog   233 YDFDRFSKHDVIGDVKVPMNTVDFGHVTEEWRDLVSAEKEEQEK--------LGDICFSLRYVPT 289

  Fly   345 AGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAA 409
            ||:||||:|:|:||.:|||.||:||||||:|:.||:|:.||||.:||.||:|.:||||:|::|..
 Frog   290 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 354

  Fly   410 EGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
            :     ::.|.:.:.:||:|::.||:.||::.: |.||:...|.||:::..:|||.||:||.|
 Frog   355 Q-----IQKVQVVVTVLDYDKIGKNDAIGKVFV-GYNSTGAELRHWSDMLANPRRPIAQWHTL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 56/150 (37%)
C2B_Synaptotagmin-4 332..473 CDD:176049 66/141 (47%)
syt1XP_017947750.1 Syt1_N 6..114 CDD:409248
C2A_Synaptotagmin-1-5-6-9-10 145..268 CDD:176031 53/143 (37%)
C2B_Synaptotagmin-1 277..412 CDD:176047 66/141 (47%)
Blue background indicates that the domain is not in the aligned region.

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