DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt1b

DIOPT Version :9

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001082930.1 Gene:syt1b / 100034471 ZFINID:ZDB-GENE-060503-166 Length:388 Species:Danio rerio


Alignment Length:442 Identity:135/442 - (30%)
Similarity:203/442 - (45%) Gaps:132/442 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SPMQDQSTSP--IAQPNVKY--SEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLH----NSLHHSP 147
            :|:...|:||  :||...|.  |......|.|.      |.|..|  .|.||:.    |.||..|
Zfish     6 APLAASSSSPASLAQKESKIPGSTISSPTAVHP------QTTTAD--SLVHSIRSKFLNELHKVP 62

  Fly   148 V---ETIANGSVTITL----------------------------DDHSLTNGKE---------LT 172
            :   .|.|.|.:|:.:                            :|.:::|.||         .|
Zfish    63 LPSWATAALGFITVFIVLSCCLCIFRKMIFKKKKEKGGKEKNEKNDINMSNVKEEGTKQAVHHTT 127

  Fly   173 VTD---------QYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQA 228
            .:|         :..|||.:.:.|.|....:.|:|.:||..||... ..|||             
Zfish   128 DSDAKEEDSESKEAQKLGKLLYTLDYNFTDSTLIVGVIRAEGLAAM-DMSGT------------- 178

  Fly   229 ATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTF---YGLNMNDLQNMSLHFVILSFDRYSR 290
             :|||||:.|||||:.|.:|:|.|.|..|.::|.|||   |.    :|...:|...:..|||:|:
Zfish   179 -SDPYVKVYLLPDKKKKFETKVHRKTLEPTFNEHFTFKVPYA----ELGGKTLVMTVYDFDRFSK 238

  Fly   291 DDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKA 355
            .|.||:|...:..::...:::|...:.|     :.|...:..|::.:||.:.|.||:||||:|:|
Zfish   239 HDAIGDVRLQMNKVDFSHLTEEWRDLQK-----AEKEEQERLGDICLSLRYVPTAGKLTVVVLEA 298

  Fly   356 RNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVS 420
            :||.:|||.||:||||||:|:.||:|:.||||.:||.||:|.:||||:|::|             
Zfish   299 KNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVP------------- 350

  Fly   421 LELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKL 472
                         :|.|.|              ||:::..:|||.||:||.|
Zfish   351 -------------SEQIQR--------------HWSDMLANPRRPIAQWHAL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 47/145 (32%)
C2B_Synaptotagmin-4 332..473 CDD:176049 57/141 (40%)
syt1bNP_001082930.1 C2A_Synaptotagmin-1-5-6-9-10 143..266 CDD:176031 46/141 (33%)
C2 275..376 CDD:301316 57/141 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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