DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt4 and syt1b

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_021323234.2 Gene:syt1b / 100034471 ZFINID:ZDB-GENE-060503-166 Length:404 Species:Danio rerio


Alignment Length:380 Identity:122/380 - (32%)
Similarity:186/380 - (48%) Gaps:92/380 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SPMQDQSTSP--IAQPNVKY--SEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLH----NSLHHSP 147
            :|:...|:||  :||...|.  |......|.|.      |.|..|  .|.||:.    |.||..|
Zfish    30 APLAASSSSPASLAQKESKIPGSTISSPTAVHP------QTTTAD--SLVHSIRSKFLNELHKVP 86

  Fly   148 V---ETIANGSVTITL----------------------------DDHSLTNGKE---------LT 172
            :   .|.|.|.:|:.:                            :|.:::|.||         .|
Zfish    87 LPSWATAALGFITVFIVLSCCLCIFRKMIFKKKKEKGGKEKNEKNDINMSNVKEEGTKQAVHHTT 151

  Fly   173 VTD---------QYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQA 228
            .:|         :..|||.:.:.|.|....:.|:|.:||..||... ..|||             
Zfish   152 DSDAKEEDSESKEAQKLGKLLYTLDYNFTDSTLIVGVIRAEGLAAM-DMSGT------------- 202

  Fly   229 ATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTF---YGLNMNDLQNMSLHFVILSFDRYSR 290
             :|||||:.|||||:.|.:|:|.|.|..|.::|.|||   |.    :|...:|...:..|||:|:
Zfish   203 -SDPYVKVYLLPDKKKKFETKVHRKTLEPTFNEHFTFKVPYA----ELGGKTLVMTVYDFDRFSK 262

  Fly   291 DDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKA 355
            .|.||:|...:..::...:::|...:.|     :.|...:..|::.:||.:.|.||:||||:|:|
Zfish   263 HDAIGDVRLQMNKVDFSHLTEEWRDLQK-----AEKEEQERLGDICLSLRYVPTAGKLTVVVLEA 322

  Fly   356 RNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAE 410
            :||.:|||.||:||||||:|:.||:|:.||||.:||.||:|.:||||:|::|:.:
Zfish   323 KNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPSEQ 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 47/145 (32%)
C2B_Synaptotagmin-4 332..473 CDD:176049 44/79 (56%)
syt1bXP_021323234.2 None

Return to query results.
Submit another query.