DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt4 and syt3

DIOPT Version :10

Sequence 1:NP_477464.1 Gene:Syt4 / 40876 FlyBaseID:FBgn0028400 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_005164031.1 Gene:syt3 / 100000615 ZFINID:ZDB-GENE-090601-1 Length:566 Species:Danio rerio


Alignment Length:437 Identity:145/437 - (33%)
Similarity:200/437 - (45%) Gaps:87/437 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VRSPSGQPPH-YLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQL 127
            |..|.....| ||.....|.....:.|      ..|||...|    :.||...|:.....:..|.
Zfish   163 VGGPQEMQEHSYLDMDSYPNNAATLKL------SQTSPELPP----ATEGGSAAKDLPNAHSQQQ 217

  Fly   128 TVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQY--------------G 178
            .......:.|.|     .||             |.|.....::||...|.              |
Zfish   218 VTTRPKPMTHQL-----SSP-------------DFHGEEKSEQLTSIGQIKPELYRLRQGDQGDG 264

  Fly   179 K----LGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLL 239
            |    .|.|.|.|||......|:|.|::...||.|..           ||    .:|||||:.||
Zfish   265 KQGNNCGKISFLLRYAFNTEQLVVKILKALDLPAKDA-----------NG----FSDPYVKIYLL 314

  Fly   240 PDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCP-LTS 303
            ||::.|.:|:|.|.|.|||::|.|.| |:.:.:|....|||.:..|||:||.|:||:||.. |..
Zfish   315 PDRKKKFQTKVHRKTLNPVFNETFQF-GVPLAELHARKLHFSVYDFDRFSRHDLIGQVVVDNLLD 378

  Fly   304 IEIGDISKEALSISKEIQPRSLKIRAQGR------GELLISLCWQPAAGRLTVVLLKARNLPRMD 362
            ...|...|   .|.::|        .:|.      |||..|||:.|.||||||.::||.||..||
Zfish   379 FSEGTGEK---PIWRDI--------VEGTAEKADLGELNFSLCYLPTAGRLTVTIIKATNLKAMD 432

  Fly   363 VTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLD 427
            :||.:|||||..|:..|:|:.|:||.:||.||:|.:||:..||||     ..::|.|||.:.::|
Zfish   433 LTGFSDPYVKASLVCEGRRLKKRKTSIKKNTLNPTYNEALVFDIP-----NENIESVSLIIAVMD 492

  Fly   428 WDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE 474
            :|.:..|||||...:|. ::......||..:..:||:.|..||:|.|
Zfish   493 YDCIGHNEVIGMCRMGS-DADGPGREHWTAMLANPRKPIEHWHQLVE 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt4NP_477464.1 C2A_Synaptotagmin-4-11 179..322 CDD:176034 55/147 (37%)
C2B_Synaptotagmin-4 332..473 CDD:176049 62/146 (42%)
syt3XP_005164031.1 C2A_Synaptotagmin-1-5-6-9-10 269..394 CDD:176031 54/151 (36%)
C2B_Synaptotagmin-3-5-6-9-10 403..536 CDD:176048 62/138 (45%)

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