DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and AT1G14185

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_563939.1 Gene:AT1G14185 / 837978 AraportID:AT1G14185 Length:503 Species:Arabidopsis thaliana


Alignment Length:608 Identity:152/608 - (25%)
Similarity:260/608 - (42%) Gaps:144/608 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LFMGLLEVFIR-SQ--------CDLEDPCGRASSRFRSEPDYEYDFIVIGGGSAGSVVASRLSEV 86
            :|:.::.:||. ||        .|.::..|::           :|:||:|||:||..:|:.||| 
plant     5 VFLFIISMFINLSQGAQMPYMTTDPKEVSGKS-----------FDYIVVGGGTAGCSLAATLSE- 57

  Fly    87 PQWKVLLIEAGGD---EPVGAQIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLG 148
             ::.||:||.||.   :|:.........:.|.:|   .|::..:....:..::..    ||:|||
plant    58 -KYSVLVIERGGSPFGDPLVEDKKYYGYSLINTD---EYSSVAQSFTSVDGIKNH----RGRVLG 114

  Fly   149 GTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHA--KGGLLPV 211
            |:|.:||..|.|.:    |::..  ..||..:.|...:|..|..:......|.:.:  :.|.|..
plant   115 GSSAINGGFYSRAS----DEFVK--KAGWDKDLVQESYKWVESKVVFMPELTRWQSIVQFGFLEA 173

  Fly   212 GKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSA--RAFLRPARMRNN 274
            |.:|||              |:|:....|....|.:..|.    |.|::||  ..:.:|    |.
plant   174 GFYPYN--------------GYSLEHTQGTKIGGSIFDQC----GKRHTSADLLGYGKP----NC 216

  Fly   275 LHILLNTTATKILIHPHTKNVLGVEVSDQFGSTR---KILVKK---EVVLSAGAVNSPHILLLSG 333
            :.:|||.|...|:...:....:||...:..|::.   |:.|::   ||:|:|||:.||.||||||
plant   217 ITVLLNATVKSIIFDANKTRAVGVRFMESDGNSSKSYKVHVEQHRGEVILAAGALGSPQILLLSG 281

  Fly   334 VGPKDELQQVNVRTVHNLPGVGKNLHNH------VTYFT-NFFIDDADTAPLNWATAMEYLLFRD 391
            :||::.|...::..:.||..|||.:.::      |..|: |..:|......:  ....:::|  .
plant   282 IGPENHLNDFDIPVIVNLKEVGKQMSDNPAISLLVDRFSQNLTVDPPQVVAI--TEGFKFIL--Q 342

  Fly   392 GLMSGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCARTGQVGELLSNNSRSIQIFPAVLNP 456
            .|:..|.|:      .||.|.|.:                                     :..|
plant   343 SLVLPTNIT------TTRTAISAK-------------------------------------IAFP 364

  Fly   457 RSRGFIGLRSADPLEPPRIVANYLTHEQDV---KTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVK 518
            :|:|.:.|.:.:|.|.|.:..|||.::.|:   :.:|..::.|.| |:|..........||.|..
plant   365 KSKGRLKLNNTNPRENPSVTFNYLENKADLDACQEMVLHLQHVAR-SKTVTFFLGTQAQDKLVAG 428

  Fly   519 GCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTSIMPK 583
            ..|...|       |.  :|.....|..|.|.:|      :|||.|.:|:|::.|||:|.|...:
plant   429 DEELKKF-------CI--KNVRTYYHYHGGCVVG------SVVNEEYKVNGVKRLRVVDGSTFEE 478

  Fly   584 VSSGNTHAPAVMIAE-KGAYLLK 605
            ....|..|..:|:.. :|..:||
plant   479 SPGTNPMATVLMLGRYQGIKILK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 21/72 (29%)
GMC_oxred_C 64..601 CDD:331873 142/560 (25%)
AT1G14185NP_563939.1 PRK02106 35..492 CDD:235000 142/567 (25%)
NAD_binding_8 41..99 CDD:290186 20/62 (32%)
NADB_Rossmann 109..311 CDD:304358 67/229 (29%)
GMC_oxred_C 364..492 CDD:282984 41/143 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3423
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.730

Return to query results.
Submit another query.