DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gld and AT1G12570

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_172718.2 Gene:AT1G12570 / 837814 AraportID:AT1G12570 Length:572 Species:Arabidopsis thaliana


Alignment Length:662 Identity:161/662 - (24%)
Similarity:258/662 - (38%) Gaps:177/662 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AFMLFMGLLEVFIRSQ-CD---------LEDPCGRASSRFRSEPDYEYDFIVIGGGSAGSVVASR 82
            ::.||:. |.:|:.|. |.         :.|..|..::.:       ||:|:||||:||..:|:.
plant     7 SWRLFVA-LSLFLHSPICSSDKAPNYSFMRDATGSPTTSY-------YDYIIIGGGTAGCPLAAT 63

  Fly    83 LSEVPQWKVLLIEAGGDEPVGAQIPSMF-LNFIG---SDIDYRYNTEPEPMACLSSMEQRCYWPR 143
            ||:  ...|||:|. ||.|...  |::. |:..|   ||:     :|..|.....| |......|
plant    64 LSQ--NASVLLLER-GDSPYNN--PNITRLSAFGAALSDL-----SESSPSQRFVS-EDGVINAR 117

  Fly   144 GKVLGGTSVLNGMMYVRGNREDYDDWAADG---NPGWAYNDVLPFFKKSEDNLDLDEVGT-EYHA 204
            .:||||.|.||...|.|...:...:...||   |..:.:.:....|:        ..:|. :...
plant   118 ARVLGGGSALNAGFYTRAGTKYVRNMGWDGALANESYQWVEAKVAFQ--------PPMGRWQTAV 174

  Fly   205 KGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSA--RAFLR 267
            :.|||..|..|.|              ||:...:||....|.:.    .|||.|:::|  ..:..
plant   175 RDGLLEAGIVPNN--------------GFTYDHINGTKFGGTIF----DRNGNRHTAADLLEYAD 221

  Fly   268 PARMRNNLHILLNTTATKILIHPH--TKNVL-GVEVSDQFGSTRKILVKK----EVVLSAGAVNS 325
            |    ..:.:||:.|..:||....  ||.:. ||...|:.|...:..:|:    |::||||.:.|
plant   222 P----KGITVLLHATVHRILFRTRGTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGS 282

  Fly   326 PHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDADTAPLNWATAMEYLLFR 390
            |.:|:||||||..:||..|:..|.:.|.||:.::::               |:|.......:...
plant   283 PQLLMLSGVGPSAQLQAQNITVVMDQPHVGQGMYDN---------------PMNAVFVPSPVPVE 332

  Fly   391 DGLMSGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCARTGQVGE----------LLSNNS- 444
            ..|:...||:.....:.....::         |||.....:.:....:          ||.:|| 
plant   333 VSLIEVVGITGEGTYVEAAGGEN---------FGGGGGGSSGSSSTRDYYAMFSPRATLLESNSM 388

  Fly   445 ---RSIQIFPA------VLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLS 500
               .|.|.|..      |:.|.|.|.:.|::.:|.:.|.:..||..|..|:|..|.||:.:.|:.
plant   389 TKLSSAQPFQGGFLLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVV 453

  Fly   501 QTTPLKQY----------------------------GMRLDKTVVKGCEAHAFGSDAYWECAVRQ 537
            |:....:|                            |..|..:..:.|: |..  ...|      
plant   454 QSKAFSRYKYADVSFEYLLNLTASTPVNLRPPRSGPGASLPPSAEEFCQ-HTV--TTIW------ 509

  Fly   538 NTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAY 602
                  |..|.|.:|      .||:.:.:|.||..|||:|.|.:......|..|..:|:   |.|
plant   510 ------HYHGGCVVG------RVVDGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMML---GRY 559

  Fly   603 LLKRAWGAKVXR 614
            :     |.|:.|
plant   560 M-----GVKILR 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 23/75 (31%)
GMC_oxred_C 64..601 CDD:331873 148/601 (25%)
AT1G12570NP_172718.2 PLN02785 10..572 CDD:215420 161/659 (24%)
NADB_Rossmann 46..301 CDD:304358 88/295 (30%)
NADB_Rossmann 47..>100 CDD:304358 23/62 (37%)
GMC_oxred_C 409..557 CDD:282984 39/171 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.730

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