DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gld and AT3G56060

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_567032.1 Gene:AT3G56060 / 824772 AraportID:AT3G56060 Length:577 Species:Arabidopsis thaliana


Alignment Length:642 Identity:158/642 - (24%)
Similarity:260/642 - (40%) Gaps:140/642 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FMLFMGLLEVFIRSQCDLEDPCGRASSRFRSEPDY-----EYDFIVIGGGSAGSVVASRLSEVPQ 88
            |..|: |:.|||.......|..|  :.||..:...     .:|:|:||||:||..:|:.||:  .
plant     8 FFQFI-LVAVFIFHDSCYSDEAG--NYRFMKDATLAPKLSHFDYIIIGGGTAGCALAATLSQ--N 67

  Fly    89 WKVLLIEAGG---DEPVGAQIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGGT 150
            ..||::|.||   |:|....|.: |.|.:       .|..|...:.|...|...:..|.:||||.
plant    68 ATVLVLERGGSPYDDPAATDIGN-FANTL-------LNITPNSWSQLFISEDGVFNSRARVLGGG 124

  Fly   151 SVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHA--KGGLLPVGK 213
            :|:|...|.|..    :|:.|:.  ||..::|...::..|..:..:....::.:  :.|||..|.
plant   125 TVINAGFYSRAE----EDFVAEA--GWERDEVEAAYEWVEKKVVFEPPVNKWQSAFRDGLLEAGV 183

  Fly   214 FPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHIL 278
            .||| ..:|..: .|.:.|.::.|.:|.        :.||.|.:.|::.          |.:.:.
plant   184 TPYN-GFTYEHI-VGTKFGGTIFDRDGH--------RHTAANLLEYANP----------NMIVVY 228

  Fly   279 LNTTATKILI------HPHTKNVL-----GVEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLLS 332
            |:.:..|||.      .|....|:     ||....:..:....:  .||:|||||:.||.:|:||
plant   229 LHASVHKILFTIKGNQRPKAYGVIFLDANGVSYKAELATQDSTM--SEVILSAGAIASPQLLMLS 291

  Fly   333 GVGPKDELQQVNVR-TVHNLP----GVGKNLHNHVTYFTNFFIDDADTAPLNWATAMEYLLFRDG 392
            ||||...|....|. .:.:.|    |:|.|..|.|      ||...:...::...|:....|...
plant   292 GVGPAAHLAAYRVNPVIVDQPMVGQGMGDNPMNPV------FIPSPEPVEVSLVQAVGITKFGSY 350

  Fly   393 LMSGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCARTGQVGELLSNNSRSIQ--------- 448
            :..|:.:| ::..|.            :.:|.|.|....:|....:.:|...:|:.         
plant   351 IEGGSALS-LSISLT------------RSFFDGVLNLLKKTKLPTQSISKFFKSLDLTLNVTTKA 402

  Fly   449 --IFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMR 511
              |...|..|.|||.:.||:.:|.:.|.:..||....:|:...|||:..:|::..:....:|...
plant   403 GVIIQKVNGPLSRGHLELRNTNPDDNPSVTFNYFKDPEDLNKCVEGLSTIIKVIDSKGYSKYKYP 467

  Fly   512 LDKTVVKGCEAHAFGSDAYWECAVRQNTGPEN-------------------HQAGSCKMGPSHDP 557
            |         |.|.|. .....|:..|..|.:                   |..|.|::|     
plant   468 L---------ASARGL-LNLILALPTNLRPRHITSTFDLEQYCIDTVMTIYHYHGGCQVG----- 517

  Fly   558 MAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAWGAKVXR 614
             .||::..:|.|:..||::|.|...|....|..|..:|:   |.|:     |.|:.|
plant   518 -KVVDNNYKVLGVDALRIIDGSTFLKSPGTNPQATIMML---GRYM-----GQKILR 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 23/70 (33%)
GMC_oxred_C 64..601 CDD:331873 143/587 (24%)
AT3G56060NP_567032.1 PLN02785 5..568 CDD:215420 158/642 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H81411
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D798314at2759
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - mtm950
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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