DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and CG6142

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_651466.1 Gene:CG6142 / 43178 FlyBaseID:FBgn0039415 Length:616 Species:Drosophila melanogaster


Alignment Length:577 Identity:221/577 - (38%)
Similarity:340/577 - (58%) Gaps:48/577 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAG------GDEPVGAQIPSMFLNFIGSDIDYRY 122
            |||||::|.||||.|:|:||||:....|||:|||      .|.|:.|.:..|      :..::.|
  Fly    47 EYDFIIVGAGSAGCVMANRLSEISSASVLLLEAGDQETFISDVPLTAALTQM------TRYNWGY 105

  Fly   123 NTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFK 187
            ..||...||.......|.||:|:.:||||::|.|:|.||:|.|||:|||..|.||:|:::||:|:
  Fly   106 KAEPTEHACQGLKGGVCNWPKGRGVGGTSLINFMLYTRGHRRDYDEWAAANNSGWSYDELLPYFR 170

  Fly   188 KSEDNLDLDEV-GTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQM 251
            ||| .:.:.|: .:.||.:.|.|.|....|...|..|.||:|.|:|:.:.|.||::..||..:|.
  Fly   171 KSE-RIGIPELYKSPYHGRNGQLDVQYTDYRSQLLKAFLKSGREMGYEITDPNGEHLMGFARSQA 234

  Fly   252 TARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRK---ILVK 313
            |.|||.|.|:::||::|...|.||||.:.:..|:::|.|.||...|||    |...|:   :..:
  Fly   235 TIRNGRRCSTSKAFIQPVVNRKNLHISMKSWVTRLIIDPITKTATGVE----FVKQRQRYVVRAR 295

  Fly   314 KEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTN---FFIDDA-- 373
            |||:||||.:.||.:|:|||:||.:.|::.|:..:.:|| ||.||.:|:|  .|   |.::|:  
  Fly   296 KEVILSAGTIASPQLLMLSGIGPAEHLREHNITVMQDLP-VGYNLQDHIT--LNGLVFVVNDSTV 357

  Fly   374 -DTAPLNWATAMEYLLFRDGLMSGTGISDVTAKLAT---RYADSPERPDLQLYFGGYLASCARTG 434
             |...||.:....|:....|..:..|.::..|.:.|   ::|  .:.||::|..|....|..|.|
  Fly   358 NDARLLNPSDIFRYIFAGQGPYTIPGGAEAFAFVRTPSSKFA--KDYPDMELVLGAGSLSGDRFG 420

  Fly   435 QVGELLS-------------NNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDV 486
            .:..||.             .:..:..:.|.:|.|:|||.|.|||.:|...||:..|::.|..||
  Fly   421 TMRNLLGITDEFYDYMFGDLQSKETFGLVPVLLRPKSRGRISLRSRNPFHWPRMEPNFMQHPDDV 485

  Fly   487 KTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKM 551
            :.::|||:.:::||::.|:.:.|.|.......|||...|.|:|||:|.:|:......||:|:|||
  Fly   486 RAMIEGIEMILKLSRSKPMAKMGTRFHDRPFPGCENLKFASEAYWKCCLRRYGSSLQHQSGTCKM 550

  Fly   552 GPSHDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608
            ||:.|..:||:.:||:||||||||:|.|::|.|.:|:|:|..:|:|||...::|.||
  Fly   551 GPATDNTSVVDAQLRIHGIRGLRVVDASVLPNVPAGHTNAIVIMVAEKAGDMIKDAW 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 19/30 (63%)
GMC_oxred_C 64..601 CDD:331873 218/568 (38%)
CG6142NP_651466.1 PRK02106 47..604 CDD:235000 218/572 (38%)
NADB_Rossmann 48..342 CDD:304358 127/305 (42%)
GMC_oxred_C 455..599 CDD:282984 64/143 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
98.970

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