DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and fiz

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001285254.1 Gene:fiz / 32420 FlyBaseID:FBgn0030594 Length:646 Species:Drosophila melanogaster


Alignment Length:651 Identity:225/651 - (34%)
Similarity:346/651 - (53%) Gaps:50/651 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSASASACDCLVGVPTGPTLASTCGGSAFMLFMGLLEVFIR----SQCDLEDPCGRASSRFRSEP 61
            :.|:|...|....||..|.:.         |:.|::.:.::    ||| |..|..:....:..:.
  Fly    11 LDAAAIGPDPCGSVPATPGIG---------LWSGMVTILVQTLLSSQC-LVSPASQWPVDYVGDL 65

  Fly    62 DYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEP 126
            ...|||:|||.|||||||||||||.|.|:||::|||||.||.:::|::|.....::..:.|.|||
  Fly    66 SQPYDFVVIGAGSAGSVVASRLSENPDWRVLVLEAGGDPPVESELPALFFGLQHTNFTWNYFTEP 130

  Fly   127 EPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSED 191
            ...||.:..:.||||||||:|||:..:|.|:||||||.|:|.|||.|:.||:|:.|:|||:||  
  Fly   131 SDEACQAMKDGRCYWPRGKMLGGSGGVNAMLYVRGNRRDFDGWAAMGSTGWSYDQVMPFFEKS-- 193

  Fly   192 NLDLDEVGTEYHAKG--GLLPVGKFPYNPPLSYAILKAGEELGFS-VHDLNGQNSTGFMIAQMTA 253
               :...|...|.||  .|.|..:  .:..:...|:..|.|||.. |......:.||:.....|.
  Fly   194 ---VTPQGNATHPKGYVTLKPFER--KDNDIHQMIIDGGRELGQPYVERFQEGSDTGYSHVPGTV 253

  Fly   254 RNGIRYSSARAFL-RPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKILVKKEVV 317
            |.|.|.|:.:.:| ..::.|.|||::.|...||:.:...|...:..|   :.|.|.::.|.|:||
  Fly   254 RQGQRMSTGKGYLGAVSKSRPNLHVVKNALVTKLDLDGETVKEVKFE---RAGVTHRVKVTKDVV 315

  Fly   318 LSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDADTAPLNWAT 382
            :||||::||.:||.||:||...|:::.:....:|||||:||.:||.......:|:....|:....
  Fly   316 ISAGAIDSPALLLRSGIGPSKHLKELGIPVKLDLPGVGRNLQDHVLVPVFLRLDEGQGEPMTDQA 380

  Fly   383 AM----EYLLFRDGLMSGTGISDVTAKLATRYADSPERPD---------------LQLYFGGYLA 428
            |:    :||::|.|.::....:.:...:.|..:.....||               |:|:..|...
  Fly   381 ALDSIYQYLIYRAGPLAAHSTASLVGFINTNASSDGAYPDTENHHMFFQRAHHASLELFTKGLSI 445

  Fly   429 SCARTGQVGELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGI 493
            ....|..:.|.| .:|..:.:|..:.:|.:||.:.|:|.||..||.:.:||||..:||.||:.||
  Fly   446 QDQYTEVLQEYL-KDSHLLCVFVLLSHPAARGELRLKSTDPKVPPILTSNYLTESEDVATLMRGI 509

  Fly   494 KFVIRLSQTTPLKQYGMRLDKTVVKGC-EAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDP 557
            :::..|.||...:.:...:.:..:|.| :...:.|:.||.|..:..|....||:|:.||||.:|.
  Fly   510 RYIESLEQTKAFQDHLAEIARIPIKECDQIENYRSEEYWRCYAKYFTVTCYHQSGTVKMGPDYDN 574

  Fly   558 MAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW-GAKVXRVDATWTL 621
            .|.|:..|:|||:..|||.|.||||.|.|.||:|..|||.|:.|:.::..: |..| .....|..
  Fly   575 EACVSQRLKVHGLENLRVADASIMPAVVSANTNAATVMIGERAAHFIQEDYQGEAVGANGGLWVP 639

  Fly   622 H 622
            |
  Fly   640 H 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 30/69 (43%)
GMC_oxred_C 64..601 CDD:331873 207/560 (37%)
fizNP_001285254.1 PRK02106 66..621 CDD:235000 208/565 (37%)
NADB_Rossmann 70..>105 CDD:304358 27/34 (79%)
NADB_Rossmann 142..359 CDD:304358 89/226 (39%)
GMC_oxred_C 472..617 CDD:282984 60/144 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
109.870

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