DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and CG9512

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001285253.1 Gene:CG9512 / 32419 FlyBaseID:FBgn0030593 Length:623 Species:Drosophila melanogaster


Alignment Length:636 Identity:224/636 - (35%)
Similarity:331/636 - (52%) Gaps:70/636 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ASTCGGSAFMLFMGLLEVFIRSQCDL-------EDPCG--RASSRFRSEPDYEYDFIVIGGGSAG 76
            |:...|.|..|...||...|...|||       ||...  ..:..|:    ::|||||||.|::|
  Fly     9 AARSAGPANTLMSLLLSTLITKYCDLSGQNQWPEDKGDWLEQAGGFK----HDYDFIVIGSGTSG 69

  Fly    77 SVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYW 141
            :|||.||:||..|||||:|||||.|:..:..:..:....|:.|::|:::|...||::...:.|:|
  Fly    70 AVVAGRLAEVKNWKVLLLEAGGDPPIETEFVAWHMATQFSEWDWQYHSKPNGRACMAMKGESCHW 134

  Fly   142 PRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEY---- 202
            ||||:||||:.:|.|:|.||.|:|:|||...|||||.|::||..|:|:|   ||.....:|    
  Fly   135 PRGKMLGGTNGMNAMIYARGTRKDFDDWEERGNPGWGYDEVLKHFRKAE---DLRSTRPDYKPGD 196

  Fly   203 HAKGGLLPVGKFPYNPPLSY-AILKAG-EELGF-SVHDLNGQNSTGFMIAQMTARNGIRYSSARA 264
            |..||  |:|...|.....: ..::|| :|:|: |..|....:..|.|....|...|.|.::||:
  Fly   197 HGVGG--PMGLNNYVSDNEFRTTIRAGMQEMGYGSAPDFTEGSFVGQMDILGTQDGGRRITTARS 259

  Fly   265 FLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKILVK--KEVVLSAGAVNSPH 327
            .|:  :...|||||.:....||.:   .:|.....|:......::..||  |||::||||:.||.
  Fly   260 HLK--KNTPNLHILRHAHVKKINL---DRNNRAESVTFVHRGKKEYTVKASKEVIVSAGAIGSPQ 319

  Fly   328 ILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDADT----------APLNW-- 380
            ||||||:||.|.|:.:.:....:|| ||:||.:|.:....|.||.:..          |..|.  
  Fly   320 ILLLSGIGPADHLKSLGIPVKLDLP-VGENLKDHASLPMIFQIDKSTARKPTEEELVDAMYNLLM 383

  Fly   381 ----------ATAMEYLLFRDGLMSGTGISDVTAKL-ATRYADSPERPDLQLYFGGYLASCARTG 434
                      |||:      .|.::.|.|......: .|.:....:.|:|:    ||:|:.....
  Fly   384 GRYSKLLHHEATAL------TGFINTTSIEGPNPDIQTTNFFSLMQSPELK----GYVAATGFND 438

  Fly   435 QVGE-LLSNNSRSIQIFPAVLN--PRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFV 496
            :|.: :||.|..:......:|:  |.|.|.:.|:||:.|:.|.|...|:|.|:||.|.:..:...
  Fly   439 RVAKSILSANQETNTYITYLLHLKPFSAGSLTLQSANYLDAPIIDPGYMTDERDVDTYIRALNIY 503

  Fly   497 IRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
            ..|..|....:....|.|..::.|....:.||.||.|.:|..|....|..|:.:||||.||.|||
  Fly   504 KNLPNTKAFSEREAALHKLDLEACNGLTYQSDDYWRCYIRHMTTTVYHPVGTTRMGPSTDPTAVV 568

  Fly   562 NHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW-GAK 611
            :.:|||||.:||||:|.||||.:...||:|..:|||||||.::|..: |.|
  Fly   569 DPQLRVHGAKGLRVIDASIMPDIVGANTNAACIMIAEKGADMIKEEYLGGK 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 31/74 (42%)
GMC_oxred_C 64..601 CDD:331873 206/571 (36%)
CG9512NP_001285253.1 PRK02106 56..612 CDD:235000 208/576 (36%)
NADB_Rossmann 120..352 CDD:304358 92/242 (38%)
GMC_oxred_C 463..606 CDD:282984 58/142 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
109.870

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