DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and CG9521

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_572977.1 Gene:CG9521 / 32414 FlyBaseID:FBgn0030588 Length:621 Species:Drosophila melanogaster


Alignment Length:572 Identity:230/572 - (40%)
Similarity:326/572 - (56%) Gaps:34/572 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP--SMFLNFIGSDIDYRYNT 124
            |.||||||:|.|:||..:|:||||.|||:|||:||||.|.:...:|  :.||..  .:::::|.|
  Fly    57 DSEYDFIVVGAGTAGCALAARLSENPQWRVLLLEAGGPERLVMDVPIVAHFLQL--GEMNWKYRT 119

  Fly   125 EPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKS 189
            :|...|||:....||.||||||:||:||||.|||.||||.|||.|.|.|||||::.||||:|||.
  Fly   120 QPSDHACLAMNNNRCNWPRGKVMGGSSVLNYMMYTRGNRRDYDRWEALGNPGWSFKDVLPYFKKY 184

  Fly   190 EDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTAR 254
            |.: .:.:...:|..:.|.:.|....:...::.|.:.|.::.|....|.||:...|......|.|
  Fly   185 EGS-SVPDAEEDYVGRNGPVKVSYVNWRSKIAEAFVDAAQQDGLKYRDYNGRIQNGVAFLHTTTR 248

  Fly   255 NGIRYSSARAFLRPAR-MRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRKILVKKEVVL 318
            |..|:||.||:|.|.: .|:|||:..|...||:||.|.||...|:.|..: |..:|||.:|||::
  Fly   249 NSTRWSSNRAYLYPLKGKRSNLHVRKNALVTKVLIDPQTKTAYGIMVQTE-GRMQKILARKEVIV 312

  Fly   319 SAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNH----VTYFTNF----FIDDADT 375
            ||||:|:|.:|:||||||...|::|.::.:.:| .||.||.:|    ||:.||.    |.|.:|.
  Fly   313 SAGAINTPQLLMLSGVGPAKHLREVGIKPLADL-AVGYNLQDHTAPAVTFTTNATSLKFEDFSDP 376

  Fly   376 APLNWATAMEYLLFRDGLMSGTGISDVTAKLATRYADSPERPDLQLYF-GGYLASCARTGQV--- 436
            ..:|....||......|........|:..:     .|....||::|:. ||.::|.....:.   
  Fly   377 TLINRFNRMEGPYGSPGGCEAIAFWDLDHE-----RDEDGWPDIELFLVGGSMSSNPAISRAFGL 436

  Fly   437 ---------GELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEG 492
                     .|:...:..:..|||.:|.|:|||.|.|:|:||.:.|.|.|||..|..||...|.|
  Fly   437 KKSIYDTLFAEIEDKSLNAFMIFPMILRPKSRGRIMLKSSDPFKYPLIHANYFAHPYDVDISVRG 501

  Fly   493 IKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDP 557
            :...|.|.:...:::...||.:..:..|:.|.:.|.|||.|.||..|....|.:|:.||||..|.
  Fly   502 LLKAISLMEQRGMEKINARLWEKKIPTCKQHPYKSWAYWACYVRHFTFTIYHYSGTAKMGPKSDR 566

  Fly   558 MAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAWG 609
            .|||:|.||||||:.|||.|.||||::.||:.:.|..|||||.|.::|:..|
  Fly   567 AAVVDHRLRVHGIKNLRVADASIMPEIMSGHPNGPVFMIAEKAADMIKQDHG 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 22/32 (69%)
GMC_oxred_C 64..601 CDD:331873 226/560 (40%)
CG9521NP_572977.1 PRK02106 57..614 CDD:235000 228/566 (40%)
NADB_Rossmann 61..>92 CDD:304358 20/30 (67%)
NADB_Rossmann 125..356 CDD:304358 104/233 (45%)
GMC_oxred_C 465..609 CDD:282984 65/143 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
109.870

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