DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gld and CG12539

DIOPT Version :9

Sequence 1:NP_001350861.1 Gene:Gld / 40875 FlyBaseID:FBgn0001112 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster


Alignment Length:574 Identity:217/574 - (37%)
Similarity:320/574 - (55%) Gaps:38/574 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEPEPM 129
            |||||||.|:||..:|:||||.||..|.||||||.|.:....|.:......:..::.|.:.|:.:
  Fly    58 YDFIVIGAGAAGCTLAARLSENPQVSVALIEAGGVENIAHLTPVVAGYLQQTSSNWGYKSVPQKL 122

  Fly   130 ACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLD 194
            :|.......|..||||:|||||.:|.|:|.||||.|:|.|||.|||||:|::|||:|.:|| :..
  Fly   123 SCHGMNNNECALPRGKILGGTSSINYMIYNRGNRRDFDAWAAAGNPGWSYDEVLPYFLRSE-HAQ 186

  Fly   195 LDEVGTE---YHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNG 256
            |.  |.|   ||...|.|.|....:...:..|.::|..|.|....|.||::..|....|....||
  Fly   187 LQ--GLEQSPYHNHSGPLSVEYVRFRSQMVDAFVEASVESGLPRTDYNGESQLGVSYVQANTLNG 249

  Fly   257 IRYSSARAFLRPAR-MRNNLHILLNTTATKILIHPHTKNVLGVEVSDQFGSTRK---ILVKKEVV 317
            .|:|:..|:::|.| :|:||.|...:..|:|||...||:..|||    |....|   ...:|||:
  Fly   250 RRHSAYSAYIKPVRDLRSNLQIFTFSQVTRILIDEATKSAYGVE----FHYKNKAYTFKARKEVI 310

  Fly   318 LSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDAD-----TAP 377
            ||||:.|||.:|:|||:||:|.|:.:.:..:..|| |||.:.:|:.:|...|:.:..     |:.
  Fly   311 LSAGSFNSPQLLMLSGIGPEDNLRGIGIPLIKALP-VGKRMFDHMCHFGPTFVTNTTGQTTFTSR 374

  Fly   378 LNWATAMEYLLFRDGL--MSGTGISDVTAKLATRYADSP-ERPDLQLYF-GGYLASCARTG-QVG 437
            :..|..:.:||..:..  ||..|..:..|.|.|:.::.| :.||::|.. .|.|||...|| ::|
  Fly   375 VTPAELISFLLAGNPATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGTGLKLG 439

  Fly   438 -------------ELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTL 489
                         ||.........:.....:|:|.|.:.|:..:||..|:|...|...|:||:.|
  Fly   440 ANFKDEIYDRMYRELAQAQQDHFTLLIMQFHPKSVGRLWLKDRNPLGWPKIDPKYFVAEEDVEYL 504

  Fly   490 VEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTGPENHQAGSCKMGPS 554
            ::|||..:|:.:...:::.|.||.|..|.|||.|.|.||.||.|::|..:...:||..:|:||..
  Fly   505 LDGIKASLRIIEMPAMQRIGARLLKRTVPGCEGHQFASDDYWRCSIRTLSYTLHHQVATCRMGAE 569

  Fly   555 HDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608
            .||..||||:|:|||:|.|||:||||:|...:.:|:|.|.||.||.|.:::..|
  Fly   570 SDPTTVVNHQLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIGEKAADMIRTDW 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GldNP_001350861.1 Pyr_redox_dim 29..>95 CDD:332164 19/29 (66%)
GMC_oxred_C 64..601 CDD:331873 215/565 (38%)
CG12539NP_572976.1 PRK02106 58..620 CDD:235000 216/569 (38%)
NADB_Rossmann 59..>90 CDD:304358 20/30 (67%)
NADB_Rossmann 128..355 CDD:304358 97/234 (41%)
GMC_oxred_C 471..615 CDD:282984 63/143 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I1608
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm24368
orthoMCL 1 0.900 - - OOG6_100146
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
109.870

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