DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10053 and gpatch11

DIOPT Version :9

Sequence 1:NP_001287206.1 Gene:CG10053 / 40871 FlyBaseID:FBgn0037490 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001005035.1 Gene:gpatch11 / 448554 XenbaseID:XB-GENE-5921609 Length:261 Species:Xenopus tropicalis


Alignment Length:273 Identity:104/273 - (38%)
Similarity:151/273 - (55%) Gaps:20/273 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDEEEDYMSDKFLVGLQDVRPSLVHNRGRKRQIEVESKKDE--LKKRQRETAASSGNVDNVRLQ 63
            |.:||||||||.|:..||||||.:...|..|...|.|.|..|  :|.||::..    :|:..:..
 Frog     1 MEEEEEDYMSDAFINSLQDVRPGMSMPRRVKECYEKEEKHKEANIKNRQQKLK----DVEKEKRD 61

  Fly    64 QSLNKPISADNKGFQLLAKMGYKAGSGLGITSDARTEPVGITIKSGRGGLGRE-----AAVAELA 123
            ..||:.:..:||||.||.|||||.|..||...|...||:.:.||:||.|:|.|     .|...|.
 Frog    62 TKLNEALGNENKGFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGIGHEEMKKRKAEENLE 126

  Fly   124 LKRQKLRRAHLLNKAGIKSDEEVSTEAYRRRATHKAEERKLQYDIKRCQQTCESLDLKSAITEPD 188
            ..|:|::..        |.|||.:.:.:|.|...|.||.:|:.|:.:.|:.|..||.:.:|:.|.
 Frog   127 SYRRKIQMR--------KHDEEQAADDFRMRMKSKREEIRLKADLSKSQRACMLLDGQKSISTPR 183

  Fly   189 LDFFWPPKPKDEDESQSDADDPEVEVPPKQEPYSPSEQLELLTGYLRTAYCFCYWCGTHYDDAED 253
            ..::||...:.|.:.::| ::.|.:....:|..|..|:|::||.|||..:.||.||||.|.|.||
 Frog   184 EAWYWPKMNEQEADEEAD-EETEEDEDLVEEELSTLEKLQILTSYLRGRHLFCIWCGTTYQDDED 247

  Fly   254 LGSNCPGLTRDEH 266
            :.|||||.|.::|
 Frog   248 MESNCPGDTAEDH 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10053NP_001287206.1 G-patch 73..116 CDD:279867 23/42 (55%)
DUF4187 219..266 CDD:290533 25/46 (54%)
gpatch11NP_001005035.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 28/69 (41%)
G_patch 68..114 CDD:197727 23/45 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..124 13/35 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..213 5/29 (17%)
DUF4187 215..260 CDD:372738 24/44 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10388
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44687
Inparanoid 1 1.050 180 1.000 Inparanoid score I3882
OMA 1 1.010 - - QHG59991
OrthoDB 1 1.010 - - D1277915at2759
OrthoFinder 1 1.000 - - FOG0003015
OrthoInspector 1 1.000 - - oto103573
Panther 1 1.100 - - LDO PTHR21032
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1808
SonicParanoid 1 1.000 - - X4461
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

Return to query results.
Submit another query.