DRSC/TRiP Functional Genomics Resources

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Protein Alignment lap and AT4G25940

DIOPT Version :9

Sequence 1:NP_001163538.1 Gene:lap / 40863 FlyBaseID:FBgn0086372 Length:788 Species:Drosophila melanogaster
Sequence 2:NP_194324.2 Gene:AT4G25940 / 828700 AraportID:AT4G25940 Length:601 Species:Arabidopsis thaliana


Alignment Length:670 Identity:140/670 - (20%)
Similarity:246/670 - (36%) Gaps:188/670 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SVCKATTEECIGPKKKHLDYLVHCTN--EPNVSIPHLANLLIER-SQNANWVVVYKSLITTHHLM 88
            ::.|||......||::|:..:...|:  :|...:.:..:.|.:| |:..||||..|.||..|..:
plant    35 AIVKATNHVESAPKERHIRRIFSATSVVQPRADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTL 99

  Fly    89 AYGNERFMQYL---ASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLS 150
            ..|:..|.:.|   :.......:|:|.|..:           .:.:|.|.:||.||.:|.|:...
plant   100 REGDPTFREELLNYSHRGHILRISNFKDDTS-----------PLAWDCSAWIRTYALFLEERLEC 153

  Fly   151 YRAMAFDFCKVKRGKEEGS--------------LRSMNAEKLLKTLPVLQAQLDALLEFDCQSND 201
            ||.:.:|....:..|..|:              .|.::.|:||:.||.||..|..|:....:.:.
plant   154 YRVLKYDIEAERLPKGSGASSKNVDFNASQTYRTRMLSDEELLEQLPALQQLLYRLIGCQPEGSA 218

  Fly   202 LSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLK 266
            .||.:|..:..|:.::..:::...|||||||::.:|:|::..|..||::||:...:.:.:.:|.:
plant   219 YSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYE 283

  Fly   267 VAENVGIDKG-DIPDLTKAPSSLLDALEQHLATLEGRKVSAANTPTQSSSNQRNVKSAVSALSST 330
            ..:.:.:.:. ..|.|.:.|.|.|..:|.::           ....||.|.|:.           
plant   284 YCKGLELARNFQFPTLRQPPPSFLATMEDYI-----------KEAPQSGSVQKK----------- 326

  Fly   331 SSAFGTAAASSKFDTTNGIDEQLKAQVLAEEEAAMNQYKSKVSSPTSSGAAGASAALTNPFLSSP 395
                              ::.|.|.:...|||.|  ::..:...|..:.             :..
plant   327 ------------------LEYQEKEEEEQEEEEA--EHSVQPEEPAEAD-------------NQK 358

  Fly   396 PAAQAGQPIV-------DLFGAASAQPAAAAAATKASDDLLQLG--NPFADMFDASGGGAAAVGA 451
            ..::..||::       :......|:|:...    .:||||.|.  ||.|...:.....|.|:..
plant   359 ENSEGDQPLIEEEEEDQEKIEEEDAKPSFLI----DTDDLLGLNEINPKAAEIEDRNALALAIYP 419

  Fly   452 TGFNG---ASVSSAAATN------AFVSDSNFSSVFGNTEPAASTSLPNPFFDDMSLPQIPLPAE 507
            .|...   :::.|...|.      |.|:..| ::...|..||.:|.|... ||::.|.       
plant   420 PGHEAPGPSNILSLIETGGSGWELALVTPQN-NNNNNNPRPAPNTKLAGG-FDNLLLD------- 475

  Fly   508 SVAAPFGNNINFMDQQLQQQQQAALYVQQQQQQQLQLQQQQHRPQLPQQQAILTPSMSAAQFPPG 572
                                   :||.....::|:||                   .:|.....|
plant   476 -----------------------SLYEDDSARRQIQL-------------------TNAGYGHGG 498

  Fly   573 FDALGDVLKPASASNNSNQMNVVAAGYSSN----SSSILALQQQQHQQ----------------- 616
            .|.       .:|..|..||.......|:|    ::..:|:||||.||                 
plant   499 IDT-------TAAPPNPFQMQQDPFAMSNNIAPPTNVQMAMQQQQQQQMTMMHQSPYNYTHPHDY 556

  Fly   617 HQQQHQHQLNQQQQQQPPAG 636
            ||..|.||.:.......|.|
plant   557 HQNHHHHQFSAGPSPSNPFG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lapNP_001163538.1 ANTH 21..298 CDD:284961 73/291 (25%)
Amelogenin 694..>773 CDD:197891
AT4G25940NP_194324.2 ANTH 29..317 CDD:284961 73/303 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2074
eggNOG 1 0.900 - - E1_KOG0251
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I2025
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22951
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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