DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lap and si:ch211-200p22.4

DIOPT Version :9

Sequence 1:NP_001163538.1 Gene:lap / 40863 FlyBaseID:FBgn0086372 Length:788 Species:Drosophila melanogaster
Sequence 2:XP_009301402.1 Gene:si:ch211-200p22.4 / 565799 ZFINID:ZDB-GENE-081104-61 Length:632 Species:Danio rerio


Alignment Length:799 Identity:317/799 - (39%)
Similarity:421/799 - (52%) Gaps:199/799 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLIE 67
            |:||:|.||:.||:||:.|..::|:||||||.|..||||||||||:|||||.||::|.||:.|.|
Zfish     1 MSGQSITDRIAAAQHSMTGSAISKAVCKATTHEVSGPKKKHLDYLIHCTNEMNVNVPQLADTLFE 65

  Fly    68 RSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYD 132
            |:.|::||||:|:||||||||.||||||:|||||.|:.|||::|||||.:|           |||
Zfish    66 RTTNSSWVVVFKALITTHHLMMYGNERFIQYLASRNTLFNLNNFLDKGALQ-----------GYD 119

  Fly   133 MSPFIRRYAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDC 197
            ||.|||||::|||||:||||.:|.||.|:||| .:|.:|:||.|||:||||::|.||||||:|..
Zfish   120 MSTFIRRYSRYLNEKALSYRLVAVDFTKMKRG-IDGVMRTMNTEKLIKTLPIIQNQLDALLDFQA 183

  Fly   198 QSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVG 262
            ..|:|:|||||.:|||||:|.|||||.||:|:||||||||||.|...:||||:|||||.||.::.
Zfish   184 NPNELTNGVINAAFMLLFKDSIRLFAAYNEGVINLLEKYFDMKKNQCKDALDIYKKFLYRMTKLS 248

  Fly   263 EFLKVAENVGIDKGDIPDLTKAPSSLLDALEQHLATLEGRKVSAANTPTQSSSNQRN-VKSAVSA 326
            |||||||.||||:|||||||:||||||:|||||||:|||:|     |...|:.|:.| :.:|||:
Zfish   249 EFLKVAEQVGIDQGDIPDLTQAPSSLLEALEQHLASLEGKK-----TKELSADNRANTLSNAVSS 308

  Fly   327 LSSTSSAFGTAAASSKFDTTNGIDEQLKAQVLAEEEAAMNQYKSK------VSSPTSSGAAGASA 385
            ||:|..:|  :.:||:      :||:.|.|.|.||:|.:...|::      :.:||:|       
Zfish   309 LSNTGMSF--SFSSSR------MDEKEKQQALEEEQARLQALKNQRLKEIGMQTPTAS------- 358

  Fly   386 ALTNPFLSSPPAAQAGQPIVDLFGAASAQPAAAAAATKASDDLLQLGNPFADMFDASGGGAAAVG 450
                |...|..:|......||||...::.|:           :..:.|..:|:||.......||.
Zfish   359 ----PSTQSLGSANNHNADVDLFTNTTSPPS-----------INSMPNLTSDLFDLQPAFVPAVQ 408

  Fly   451 ATGFNGASVSSAAATNAFVSDSNFSSVFGNTEPA---ASTSLP--NPFFDDMSLPQIPLPAESVA 510
            :|     .:|:|            ||.:|..|.:   :.||:|  |..||               
Zfish   409 ST-----PISTA------------SSAWGGVESSTLHSMTSMPTMNVDFD--------------- 441

  Fly   511 APFGNNINFMDQQLQQQQQAALYVQQQQQQQLQLQQQQHRPQLPQQQAILTPSMSAAQFPPGFDA 575
            |.||...:..|                                      :.||       .|:||
Zfish   442 AVFGTKASNTD--------------------------------------VKPS-------AGYDA 461

  Fly   576 LGDVLKPASASNNSNQMNVVAAGYSSNSSSILALQQQQHQQHQQQHQHQLNQQQQQQPPAGTG-K 639
            .||:|||...                           .|.|....|.|             || |
Zfish   462 SGDLLKPTVT---------------------------VHSQTPVMHHH-------------TGSK 486

  Fly   640 IITGDLDSSLMSLVDNLNINKTASAK-PVQWNSP-KNTAKPGANWTPQPMAATTGAGYRPMAHGM 702
            ::..||||||.:||.||....|...| .:||..| :.....|.||..:.|::||.....|:... 
Zfish   487 LLANDLDSSLANLVGNLQFGGTPGKKSDMQWTQPGEKKLTGGTNWQSKTMSSTTAWSPAPLPPA- 550

  Fly   703 TVSPAPITINH--PYIHASY-----------PVMPNYMQGMPVMGQPSMMGGQAAAPLTGVQPTM 754
            .:.||.:.:.|  ...:.||           |.:|.|....|.:||   |||   .|:...||.:
Zfish   551 AMPPAAMPVPHMTGMFYTSYAPAPMAFPMTTPQVPVYGMVPPQLGQ---MGG---VPVMTQQPML 609

  Fly   755 MAAPHSNATGIMQPIQPTQ 773
            ...|....|....||...|
Zfish   610 YNQPVLRPTNPFTPIPGAQ 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lapNP_001163538.1 ANTH 21..298 CDD:284961 185/276 (67%)
Amelogenin 694..>773 CDD:197891 22/91 (24%)
si:ch211-200p22.4XP_009301402.1 ANTH 19..282 CDD:284961 183/274 (67%)
DASH_Spc19 <265..348 CDD:285487 43/95 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577450
Domainoid 1 1.000 382 1.000 Domainoid score I788
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 441 1.000 Inparanoid score I1627
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1592722at2759
OrthoFinder 1 1.000 - - FOG0001047
OrthoInspector 1 1.000 - - otm24700
orthoMCL 1 0.900 - - OOG6_102822
Panther 1 1.100 - - O PTHR22951
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2028
SonicParanoid 1 1.000 - - X389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.