DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lap and picalma

DIOPT Version :10

Sequence 1:NP_001163538.1 Gene:lap / 40863 FlyBaseID:FBgn0086372 Length:788 Species:Drosophila melanogaster
Sequence 2:XP_073769735.1 Gene:picalma / 393901 ZFINID:ZDB-GENE-040426-761 Length:712 Species:Danio rerio


Alignment Length:843 Identity:329/843 - (39%)
Similarity:435/843 - (51%) Gaps:194/843 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLIE 67
            |:||:|.||:.||:|.:.|..::|:||||||.|.:||||||||||:.||||.||:||.||:.|.|
Zfish     1 MSGQSITDRITAAQHIVTGSAVSKTVCKATTHEVMGPKKKHLDYLIQCTNEMNVNIPQLADTLFE 65

  Fly    68 RSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYD 132
            |:.|.:||||:||||||||||.||||||:|||||.|:.||||:||||           .|..|||
Zfish    66 RTTNTSWVVVFKSLITTHHLMVYGNERFVQYLASRNTLFNLSNFLDK-----------SGLQGYD 119

  Fly   133 MSPFIRRYAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDC 197
            ||.|||||::|||||::|||.:||||.||||| .:|.:|:||.||||||:|::|.|:||||:|:.
Zfish   120 MSTFIRRYSRYLNEKAVSYRQVAFDFTKVKRG-ADGVMRTMNTEKLLKTIPIIQNQMDALLDFNV 183

  Fly   198 QSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVG 262
            .:|:|:|||||.:|||||:|.|||||.||:||||||||||||.|...::.||:|||||.||.|:.
Zfish   184 NANELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKAQCKEGLDIYKKFLTRMTRIS 248

  Fly   263 EFLKVAENVGIDKGDIPDLTKAPSSLLDALEQHLATLEGRKVSAANTPTQSSSNQRNVKSAVSAL 327
            |||||||.||||:||||||::||||||||||||||:|||:||..:...:::|:    :.:|||:|
Zfish   249 EFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKVKDSTAASRAST----LSNAVSSL 309

  Fly   328 SSTSSAFGTAAASSKFDTTNGIDEQLKAQVLAEEEAAMNQYK-------SKVSSPTSSGAAGASA 385
            ::|..:|..|            ||:.|...|.||:|.:...|       ||..|.||:.||    
Zfish   310 ANTGISFTKA------------DEREKQAALEEEQARLKALKEQRLKELSKKPSTTSTTAA---- 358

  Fly   386 ALTNPFLSSPPAAQAGQ----PIVDLFGAASAQPAAAAAATKASDDLLQLGNPFADMFDASGGGA 446
                    ||.:.:.|.    |.:|||.|.|   ..|.:..|..:|||.|...|......|.|..
Zfish   359 --------SPVSTETGSISTVPAIDLFSATS---TFANSTPKVPNDLLDLQPAFQPSLPLSSGLP 412

  Fly   447 AAVGATGFNGASVSSAAATNAFVSDSNFSSVFGNTEPAASTSLP--NPFFDDMSLPQIPLPAESV 509
            .|                       :.:...|.:|| ||..|:|  |||.....:..:.||..|.
Zfish   413 LA-----------------------NTWGDPFTSTE-AADDSIPNLNPFLTKPVVDPVHLPVVSS 453

  Fly   510 AAPFGNNINFMDQQLQQQQQAALYVQQQQQQQLQLQQQQHRPQLPQQQAILTPSMSA--AQFPPG 572
            .|     ::|..:....:.....:..........|...:     |...|.|....||  |..||.
Zfish   454 DA-----VSFSSRTPSHEMFGDSFCSPTAYPNTPLFHSE-----PSTVAGLFGGFSAPPAAQPPS 508

  Fly   573 -------FDA-----------------LGDVLKPASASNNSNQMNVVAAGYSSNSSSILALQQQQ 613
                   ||:                 ||.:|||...|.|                         
Zfish   509 STGLNVDFDSVFGNKSVANSTDSADDILGGILKPTVTSPN------------------------- 548

  Fly   614 HQQHQQQHQHQLNQQQQQQPPAG-TGKIITGDLDSSLMSLVDNLNINKTASAKPVQWNSP-KNTA 676
                           |...|.|. :||:::.||||||.:||.||.|....:...:.|:.| :...
Zfish   549 ---------------QGLTPSAQLSGKLVSDDLDSSLANLVGNLGIGNGTAKNDIHWSQPGEKKL 598

  Fly   677 KPGANWTPQPMAATTGAGYRPMAHGMTVSP--APITINHPYIHASYP------VMPNYMQGMPVM 733
            ..|.||.|:....||   :.|......:.|  ||..:..|   |:.|      .||..|..|.:|
Zfish   599 TGGMNWQPKTAPTTT---WNPATMNGMLFPQYAPSVMAFP---ATTPTGMMGYAMPPQMGSMAMM 657

  Fly   734 GQPSMMGGQAA-------APLTGVQPTMMAAPHSNATGIMQPIQ-PTQNGSNKGVPLDPFGAL 788
            .||:||..|..       .|::|.|.:..::|.|::     |:: |.|         |||..|
Zfish   658 TQPTMMYTQPVMRPANPFGPVSGAQLSTASSPSSSS-----PLRAPGQ---------DPFAQL 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lapNP_001163538.1 ANTH 23..296 CDD:400137 183/272 (67%)
picalmaXP_073769735.1 None

Return to query results.
Submit another query.