DRSC/TRiP Functional Genomics Resources

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Protein Alignment lap and unc-11

DIOPT Version :9

Sequence 1:NP_001163538.1 Gene:lap / 40863 FlyBaseID:FBgn0086372 Length:788 Species:Drosophila melanogaster
Sequence 2:NP_001361961.1 Gene:unc-11 / 171952 WormBaseID:WBGene00006751 Length:642 Species:Caenorhabditis elegans


Alignment Length:789 Identity:315/789 - (39%)
Similarity:398/789 - (50%) Gaps:166/789 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TMAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLI 66
            |..||||:|||.||:|||||..|.|::|||||||.:.|||||||||:|||||||||||.:|||||
 Worm    15 TTGGQTISDRLTAAKHSLAGSQLGKTICKATTEEVMAPKKKHLDYLLHCTNEPNVSIPSMANLLI 79

  Fly    67 ERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGY 131
            ||:||.||.||||:|||.|::|.||||||.|||||.|:||||::|:||          .||..||
 Worm    80 ERTQNPNWTVVYKALITIHNIMCYGNERFSQYLASCNTTFNLTAFVDK----------VGGAGGY 134

  Fly   132 DMSPFIRRYAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFD 196
            |||..:||||||:.||..:||..||||||||||:|:|.||:|:.:|||||:|:||.|:||||||.
 Worm   135 DMSTHVRRYAKYIGEKINTYRMCAFDFCKVKRGREDGLLRTMHTDKLLKTIPILQNQIDALLEFS 199

  Fly   197 CQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRV 261
            ..:::|:|||||.||:|||||||||||||||||||:||||||||||..|||||.||.||.|:|:|
 Worm   200 VTTSELNNGVINCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRLDKV 264

  Fly   262 GEFLKVAENVGIDKGDIPDLTKAPSSLLDALEQHLATLEGRKVSAANTPTQSSSNQRNVKSAVSA 326
            .|||:|||:||||:|:|||||:||:|||:|||.||..|||.|   |..|||.........:..:.
 Worm   265 AEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---APPPTQQHVAPHQFTTGFAF 326

  Fly   327 LSSTSSAFGTAAASSKFDTTNGIDEQLKAQVLAEEEAAMNQYKSKVSSPTSSGAAGASAALTNPF 391
            ......|.|.|.               :.:.:..|:..:.|::.:..|..|:          |||
 Worm   327 SQQPQPALGDAE---------------RQRYIELEQERLRQFEDQKKSINSA----------NPF 366

  Fly   392 LSSPPAAQAGQPIVDLFGAASAQPAAAAAATKASDDLLQLGNPFADMFDASGGGAAAVGATGFNG 456
            .:.               .|||.||.|.:|  |..|||       |||.:|...|.         
 Worm   367 AND---------------VASAAPAPATSA--AQPDLL-------DMFQSSAAPAP--------- 398

  Fly   457 ASVSSAAATNAFVSDSNFSSVFGNTEPAASTSLPNPFFDDMSLPQIPLPAESVAAPFGNNINFMD 521
               .:|..||.|   .||         ||.::.|.         .:|.|| :.:||||      .
 Worm   399 ---QTADVTNPF---GNF---------AAPSAFPT---------NVPPPA-AHSAPFG------V 432

  Fly   522 QQLQQQQQAALYVQQQQQQQLQLQQQQHRPQLPQQQAILTPSMSAAQFPPGFDALGDVLKPASAS 586
            |...|...|..|....|...:| .|..:.|:.|...|...|.|..|  ||       |..|.::.
 Worm   433 QPAPQHSAAPFYANLHQAPPMQ-SQAPNEPENPFITAPAAPQMHNA--PP-------VPPPPASQ 487

  Fly   587 NNSNQMNVVAAGYSSNSSSILALQQQQHQQHQQQHQHQLNQQQQQQPPAGTGKIITGDLDSSLMS 651
            .....:|..|...::.:||........|                |..|.|.......|    |..
 Worm   488 GAPAPINPFADPSATAASSAQPFGDPGH----------------QAAPFGYPNAHPDD----LAR 532

  Fly   652 LVDNLNINKTASAKPVQWNSPKNTAKP---GANWTPQPM-AATTGAGYRPMAHGMTVSPAPITIN 712
            :...:::|:.....|..||:..:....   ||...|||| .|..|...:|.......:||     
 Worm   533 MTAQMSLNQQGYRAPAGWNTTTSAVSNNPFGATSAPQPMYTAPMGMYQQPFGAQPMWNPA----- 592

  Fly   713 HPYIHASYPVMPNYMQGMPVMGQPSMMGGQAAAPLTGVQPTMMAAPHSNATGIMQPIQPTQNGSN 777
                .|:|.....|.|.:|...|..:....||          |||  .||....|.         
 Worm   593 ----MAAYGQQYGYGQPVPPQQQHQIQLVHAA----------MAA--KNAAQAQQA--------- 632

  Fly   778 KGVPLDPFG 786
            :....||||
 Worm   633 QAASADPFG 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lapNP_001163538.1 ANTH 21..298 CDD:284961 191/276 (69%)
Amelogenin 694..>773 CDD:197891 17/78 (22%)
unc-11NP_001361961.1 ANTH_N_AP180 37..154 CDD:340782 83/126 (66%)
MISS 392..588 CDD:318115 58/265 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158215
Domainoid 1 1.000 396 1.000 Domainoid score I381
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 442 1.000 Inparanoid score I927
Isobase 1 0.950 - 0 Normalized mean entropy S2368
OMA 1 1.010 - - QHG56288
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001047
OrthoInspector 1 1.000 - - oto18731
orthoMCL 1 0.900 - - OOG6_102822
Panther 1 1.100 - - LDO PTHR22951
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2028
SonicParanoid 1 1.000 - - X389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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