DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lap and snap91

DIOPT Version :9

Sequence 1:NP_001163538.1 Gene:lap / 40863 FlyBaseID:FBgn0086372 Length:788 Species:Drosophila melanogaster
Sequence 2:XP_012818222.1 Gene:snap91 / 100170497 XenbaseID:XB-GENE-1013213 Length:916 Species:Xenopus tropicalis


Alignment Length:991 Identity:343/991 - (34%)
Similarity:449/991 - (45%) Gaps:311/991 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MAGQTINDRLLAARHSLAGQGLAKSVCKATTEECIGPKKKHLDYLVHCTNEPNVSIPHLANLLIE 67
            |:|||:.||:.||::|:.|..:|::||||||.|.:||||||||:|:..|||.||:||.:|:.|.|
 Frog     1 MSGQTLTDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDFLIQATNETNVNIPQMADTLFE 65

  Fly    68 RSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFLDKGTVQDGGMGVPGGRMGYD 132
            |:.|::||||:|:|:||||||.:|||||:|||||.|:.||||:||||           .|..|||
 Frog    66 RATNSSWVVVFKALVTTHHLMVHGNERFIQYLASRNTLFNLSNFLDK-----------SGSHGYD 119

  Fly   133 MSPFIRRYAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDC 197
            ||.|||||::|||||:.|||.|||||.:||:| .||.:|:|..|||||.:|:||.|:|||||||.
 Frog   120 MSTFIRRYSRYLNEKAFSYRQMAFDFARVKKG-AEGVMRTMLPEKLLKGMPILQGQIDALLEFDV 183

  Fly   198 QSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVG 262
            ..|:|:|||||.:|||||:|||:|||||||||||||||:|:|.|...:|||::||:||.||.||.
 Frog   184 HPNELTNGVINAAFMLLFKDLIKLFACYNDGIINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVS 248

  Fly   263 EFLKVAENVGIDKGDIPDLTK-------APSSLLDALEQHLATLEGRKVSA---ANTPTQSSSNQ 317
            ||:||||.||||||||||||:       ||||||:.|||||.||||:|..:   :.:|...||..
 Frog   249 EFMKVAEQVGIDKGDIPDLTQDGCIDEPAPSSLLETLEQHLNTLEGKKPGSSEGSGSPVGKSSPA 313

  Fly   318 RNVKSAVSALSSTSSA------FGTAAASS----------------KFDTTNGIDEQLKAQVLAE 360
            ..|.|..:..|.|...      |.||:|::                .|.:|.     :.|..|..
 Frog   314 TTVTSPNATPSKTVDTSPPIDLFATASAAAAICSPKLSNDLLDLQPDFSSTT-----VSASALPG 373

  Fly   361 EEAAMNQY--KSKVSSPTSSGAAGASAALTNPFLSSPPAAQAGQPI------------------- 404
            ..:|....  :..:|:|::|.....:..|::|| |:.|:|....|.                   
 Frog   374 GASAWGDLLGEDSLSAPSASTVTSEAPQLSDPF-SAEPSASIAAPSETTNSSVSAAATNIPTSSA 437

  Fly   405 -VDLFG-----------------AASAQPAAAAAATKASDDLLQLGNPFA------------DMF 439
             |||||                 ||...||..|||..|...    .:|||            |:|
 Frog   438 EVDLFGDAFAASPGEATATLDGAAAPPTPAPVAAALDACSG----HDPFAPSEGSAEAAPELDLF 498

  Fly   440 ------------------------------DASGGGAAAVGATGFNGASVSSAAATNAFVSDSNF 474
                                          ......|||..||.....:.::|..|.|..|.|..
 Frog   499 ALKPTETSAPVVTPTTSAASTVLATTPSPPPPPAAVAAAAAATTTTTTTTTTATTTAATTSASTT 563

  Fly   475 SS--------VFGN-----------TEPAASTSLPNPFFDDMSLP---QIPLPAESV-------- 509
            ::        :||:           |:|.|:.|:.....|..|.|   ..|:|..|:        
 Frog   564 TTTTAPPALDIFGDLFDSVSETPAATKPDAAPSIDLFGTDAFSSPPHGASPVPEASLTGDLLSVD 628

  Fly   510 ------AAP---------------FGNNINFMDQQLQQQQQAALYVQQQQQQQLQL-------QQ 546
                  |||               ||:...    .:.:.|.||:...........|       ..
 Frog   629 TFAAPAAAPAASPAKTESSAVLDLFGDAFG----GVAEPQPAAMAPTSSSASADLLAGFGGSFMA 689

  Fly   547 QQHRPQLPQQQAILTPSM-----------SAAQFPPG-FDALGDVLKPASASNNSNQMNVVAAGY 599
            ....|..|.|..::.||.           ||:.|... ||.|||:|.|....             
 Frog   690 PSPTPITPAQNNLIQPSFDAAFVTSQPAASASSFDASVFDGLGDLLIPTMTP------------- 741

  Fly   600 SSNSSSILALQQQQHQQHQQQHQHQLNQQQQQQPPAG----TGKIITGDLDSSLMSLVDNLNINK 660
            :|..||.|.                        |.||    .||.:..||||||.|||.||.|..
 Frog   742 ASQPSSSLT------------------------PSAGNAGAAGKALGSDLDSSLASLVGNLGIAG 782

  Fly   661 TASAK-PVQWNSPKNTAKPGANWTPQPMAATTGAGYRPMAHGMTVSPAPITINHPYIHASYPVMP 724
            |...| .:|||:.:.....||||.|:...||...|      |.:.||                  
 Frog   783 TTVKKGDLQWNAGEKKLTGGANWQPKVAPATWSTG------GPSSSP------------------ 823

  Fly   725 NYMQGMPVMGQPSMMGGQAAAPLTGVQPTMMAAPHS---------NATGI-MQPIQPTQNG---- 775
              |||             :..|::||.|...|||.:         :.||: |.|.||...|    
 Frog   824 --MQG-------------STPPVSGVPPAASAAPSTQPVAGFGLPSGTGVPMMPQQPMMYGQPMI 873

  Fly   776 -------SNKGVPLDP 784
                   :..|.||.|
 Frog   874 RPSFGGAAVPGAPLSP 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lapNP_001163538.1 ANTH 21..298 CDD:284961 181/283 (64%)
Amelogenin 694..>773 CDD:197891 20/88 (23%)
snap91XP_012818222.1 ANTH 19..291 CDD:284961 181/283 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 379 1.000 Domainoid score I838
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 432 1.000 Inparanoid score I1676
OMA 1 1.010 - - QHG56288
OrthoDB 1 1.010 - - D1592722at2759
OrthoFinder 1 1.000 - - FOG0001047
OrthoInspector 1 1.000 - - otm47713
Panther 1 1.100 - - O PTHR22951
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2028
SonicParanoid 1 1.000 - - X389
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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