DRSC/TRiP Functional Genomics Resources

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Protein Alignment sas and ccn4b

DIOPT Version :9

Sequence 1:NP_001262337.1 Gene:sas / 40861 FlyBaseID:FBgn0002306 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_001107100.1 Gene:ccn4b / 792714 ZFINID:ZDB-GENE-080220-16 Length:356 Species:Danio rerio


Alignment Length:381 Identity:72/381 - (18%)
Similarity:116/381 - (30%) Gaps:148/381 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 RDCDERCTCNRGDWMCEPRCRGLSYPRGSQRSMANPNCLEKMVEEDECCRVMECSEPQLEPTVVA 613
            |.|...|.|.:...:|                   |:.:..:::..:||:.  |::.        
Zfish    39 RYCKWPCKCPKSALVC-------------------PHGVSLLMDGCDCCKA--CAKQ-------- 74

  Fly   614 TEGAAPSTNGTGESAVTLPTTD-------DEATPKPR-----------TDCHYNSGVYKFRERLE 660
                      .||:.......|       |.:..|||           |.|.||..:|:..:..:
Zfish    75 ----------AGETCNERDICDYHKGLYCDYSADKPRYEKGVCAYVMGTGCEYNGVIYRNGQSFQ 129

  Fly   661 IGCEQICHCAEGGVMDCRPRCPERNHTRLDKCVYVKDPKDV-----CCQLELCDVTLDDHEQQPT 720
            ..|:..|.|..|.: .|.|.|.:    .|...|:.:.||.|     ||:..:|       |:...
Zfish   130 PNCKYRCLCVNGAI-GCVPLCTD----SLPPRVWCQSPKRVKIPGQCCEKWIC-------EESRK 182

  Fly   721 PLQSNNNEDPEEID--------------PFR----------------------FQEQARDAGGAK 749
            |.::|....|.|:.              |:.                      .::::|      
Zfish   183 PRKTNPRHAPAEVSANDIWHNNCIAQTTPWSPCSKTCGRGISLRISNENAGCVMEKESR------ 241

  Fly   750 PTCTFKGAEYDVGQQFRDGCDQLCICNEQGIHCAKLECPSNFGLDVQDPHCIRWEPVPADFKPSP 814
             .|..:..|.|:.:.||.|...|.|..|...        .||.:.    .|:       ..||..
Zfish   242 -LCNLRPCEVDITKHFRPGKKCLNIYREPEF--------QNFTIS----GCV-------SKKPYW 286

  Fly   815 PNCCPESMRCVDNGTC-SYQG--VQIENWSPVPANLTG---CDQHCYCENGRVECR 864
            |..|..   |.|...| .|:.  :::|...|..|.||.   ....|:|   .:.||
Zfish   287 PKYCGV---CTDERCCIPYKSKTIEVEFECPDGALLTWKYMWINACFC---NLSCR 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sasNP_001262337.1 VWC 752..824 CDD:214564 16/71 (23%)
fn3 1413..1479 CDD:278470
FN3 1516..1605 CDD:238020
ccn4bNP_001107100.1 IGFBP 41..93 CDD:278641 11/90 (12%)
VWC 115..174 CDD:214564 18/63 (29%)
TSP1 208..249 CDD:214559 3/47 (6%)
GHB_like 272..335 CDD:304424 18/79 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11348
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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