DRSC/TRiP Functional Genomics Resources

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Protein Alignment sas and ccn4a

DIOPT Version :9

Sequence 1:NP_001262337.1 Gene:sas / 40861 FlyBaseID:FBgn0002306 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_001159702.1 Gene:ccn4a / 560713 ZFINID:ZDB-GENE-070705-178 Length:360 Species:Danio rerio


Alignment Length:414 Identity:71/414 - (17%)
Similarity:121/414 - (29%) Gaps:160/414 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 TSTTTTTAQPETEMPKIVEITASGDTMQRECLANNKSYKHGELMERDCDERCTCNRGDWMCEPRC 568
            :|...:|.:|.|..|                 .|...|         |...|.|.:...||.|  
Zfish    25 SSNLLSTEEPITPQP-----------------YNRSQY---------CQWPCKCPKTPPMCPP-- 61

  Fly   569 RGLSYPRGSQRSMANPNCLEKMVEEDECCRVMECSEPQLEPTVVATEGAAPSTNGTGESAVTLPT 633
             |:|.                :::..:|||.  |::.       ..|......|......:..  
Zfish    62 -GVSL----------------LMDGCDCCRA--CAKQ-------VREACNEKENCDHHRGLYC-- 98

  Fly   634 TDDEATPKPR-----------TDCHYNSGVYKFRERLEIGCEQICHCAEGGVMDCRPRCPERNHT 687
              |.:..|||           |.|.:|..:|:..:..:..|:..|.|..|.: .|.|.|.|....
Zfish    99 --DYSADKPRYEKGVCAFLPGTGCEHNGVIYRNGQSFQPNCKYQCLCVNGAI-GCVPLCNESQPP 160

  Fly   688 RLDKCVYVKDPKDV-----CCQLELCDVTLDDHEQQP-------------------------TPL 722
            |    |:.::|:.|     ||:|.:||.:....:..|                         :|.
Zfish   161 R----VWCQNPQRVKVHGQCCELWICDESRRGRKTAPRHTMAALSSVKKNWHKNCVAQTTSWSPC 221

  Fly   723 Q-----------SNNNEDPEEIDPFRFQEQARDAGGAKPTCTFKGAEYDVGQQFRDGCDQLCICN 776
            .           :|||:..|.::..|.             |..:....|:.:..:.|        
Zfish   222 SKTCGRGVSLRITNNNKKCEMVNESRL-------------CNIRPCNVDITKHIKPG-------- 265

  Fly   777 EQGIHCAKLECPSNFGLDVQDPHCIRWEPVPADFKPSPPNCCPESMRCVDNGTCSYQGVQIE--- 838
            ::.::..:.|.|.||.:.    .|....    .::|.....|.:...|:     .|:...||   
Zfish   266 KKCLNIYRAEKPQNFTIS----GCTSTN----TYRPKYCGVCTDERCCI-----PYKSKTIEVDF 317

  Fly   839 --------NWSPVPANLTGCDQHC 854
                    .|..:..|...|:..|
Zfish   318 QCPNGPGFTWQVMWINACFCNLSC 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sasNP_001262337.1 VWC 752..824 CDD:214564 10/71 (14%)
fn3 1413..1479 CDD:278470
FN3 1516..1605 CDD:238020
ccn4aNP_001159702.1 IGFBP 46..98 CDD:278641 14/79 (18%)
VWC 120..178 CDD:214564 16/62 (26%)
GHB_like 275..341 CDD:304424 14/78 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11348
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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