DRSC/TRiP Functional Genomics Resources

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Protein Alignment sas and Ccn

DIOPT Version :10

Sequence 1:NP_731141.1 Gene:sas / 40861 FlyBaseID:FBgn0002306 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_730294.1 Gene:Ccn / 39972 FlyBaseID:FBgn0052183 Length:470 Species:Drosophila melanogaster


Alignment Length:221 Identity:53/221 - (23%)
Similarity:80/221 - (36%) Gaps:70/221 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   812 PSPPNCCPESMRCVDNGTCSYQGVQIENWSPVPANLTGCDQHCYCENGRVECRAACP--PVPALP 874
            |:|.||      .|.|.|.:: ||..:         ..|...|.|||||..|...||  .:|| |
  Fly    36 PNPANC------SVGNTTFAH-GVTFK---------LDCKTQCVCENGRHACSTLCPNEQLPA-P 83

  Fly   875 PADLPCHPALARLLPIPDDECCKHWMCAPQIPKIGGAGQDEETEATSTHSSIPANETTTTTA--- 936
            ...:.|..  .||:.:| ..|||.|:|         .....:..||..:|:...|.|..:.:   
  Fly    84 EDTISCRS--PRLVEVP-GHCCKMWLC---------ENPTADVYATCHNSTTSGNWTACSRSCGL 136

  Fly   937 -TANKSTSIPSKVPQIK-----------KDEEKRPPASGAFYPTLDGKPPKSIGGLGIFEKPEKP 989
             ||.:.|:..:...|:.           ||:.:            |.|..:|           :|
  Fly   137 GTATRHTTTHAGCHQLSNLRLCENRRCDKDDHE------------DNKWSRS-----------RP 178

  Fly   990 EKAHKKVQHQQQQHQQQEQQEQQQHQ 1015
             ..||:.||:...|..|.....::|:
  Fly   179 -LTHKRKQHRAHSHSHQRYHHHKEHE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sasNP_731141.1 VWC 752..824 CDD:214564 4/11 (36%)
fn3 1413..1479 CDD:394996
FN3 1516..1605 CDD:238020
CcnNP_730294.1 VWC 41..104 CDD:450195 25/82 (30%)
TSP1_spondin 118..163 CDD:480609 7/44 (16%)
Blue background indicates that the domain is not in the aligned region.

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