DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMAD1 and Dad

DIOPT Version :10

Sequence 1:NP_005891.1 Gene:SMAD1 / 4086 HGNCID:6767 Length:465 Species:Homo sapiens
Sequence 2:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster


Alignment Length:459 Identity:115/459 - (25%)
Similarity:185/459 - (40%) Gaps:132/459 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    35 DALVKKLKKK---------KGAMEELEKALSCPGQPS--------NCVTIPRSLDGRLQVSHRKG 82
            :||:|:||:|         |..::...|......:|:        .|:.||.......:      
  Fly   222 EALMKQLKRKQRNELLLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIPCKTQTVWE------ 280

Human    83 LPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRV------ESPVLPPVLVP 141
             |||...|::.|.:|.:..|||.|..|  |.......:|.||.|:.|:      |||. ||.   
  Fly   281 -PHVTASRLFFWRELWNAKELKRLPTC--PAARDCIYMCCNPLHWFRILHQP
ETESPT-PPY--- 338

Human   142 RHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHS 206
                   |.|.:.:.::.               .|::.:.:....:..|::.....|.|:.|   
  Fly   339 -------QRSKMLRLKDA---------------DFEEDSQNDAKSAALSTWSAESTSISNIY--- 378

Human   207 PTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPPLPSEINRGDVQAVAYEEPKHW 271
                            .|..|    :.:|.||.   |.|     :.|::               |
  Fly   379 ----------------KPALY----ESVTTDGK---DHN-----INSQV---------------W 400

Human   272 CSIVYYELNNRVGEAFHASSTSVLVDGFTD--PSNNKNRFCLGLLSNVNR--NSTIENTRRHIGK 332
            |.|.|:|:.:||||.|||.:.:|.:  :||  .::..:..||..|:....  :|.:...|..:|.
  Fly   401 CQIAYWEMAHRVGEFFHAKTNAVNI--YTDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTVGL 463

Human   333 GVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPT------TVCKIPSGCSLKIFNNQEFAQL 391
            ||.|....|:|:.....:::|||.|          ||      .|||:..|..||.|.... |:|
  Fly   464 GVTLSLENGDVWIYNRGNTTIFVDS----------PTLSENLDRVCKVMPGYCLKAFETNR-AEL 517

Human   392 LAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHL-HGPLQWLDKVLTQMG 455
            |:.. :||...:..:... :|::||.||||.:|.|||:...|||:|:|. |...|:|  :|.:..
  Fly   518 LSMR-DHGHHPMGPVDYF-SIKISFGKGWGRDYKRQDIMGCPCWLEVHFSHLRXQYL--MLARSA 578

Human   456 SPHN 459
            .||:
  Fly   579 GPHS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMAD1NP_005891.1 MH1_SMAD_1_5_9 9..132 CDD:199814 29/119 (24%)
PRK10263 <133..>244 CDD:236669 15/110 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..248 12/85 (14%)
MH2_SMAD_1_5_9 265..465 CDD:199822 66/206 (32%)
L3 loop. /evidence=ECO:0000269|PubMed:11779505 418..428 6/9 (67%)
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 29/115 (25%)
MH2_I-SMAD 400..565 CDD:199821 60/179 (34%)

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