DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMAD1 and Mad

DIOPT Version :10

Sequence 1:NP_005891.1 Gene:SMAD1 / 4086 HGNCID:6767 Length:465 Species:Homo sapiens
Sequence 2:NP_001259992.1 Gene:Mad / 33529 FlyBaseID:FBgn0011648 Length:525 Species:Drosophila melanogaster


Alignment Length:467 Identity:351/467 - (75%)
Similarity:383/467 - (82%) Gaps:36/467 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     5 SLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPR 69
            |||||||||||:|||||||||||||||||||:|||||||:|||:||||:|||||||||.||||||
  Fly    89 SLFSFTSPAVKKLLGWKQGDEEEKWAEKAVDSLVKKLKKRKGAIEELERALSCPGQPSKCVTIPR 153

Human    70 SLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPV 134
            ||||||||||||||||||||||||||||||||||||||.|::||.:|||||||||||||||||||
  Fly   154 SLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLELCQYPFSAKQKEVCINPYHYKRVESPV 218

Human   135 LPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDS-FQQPNSHPFPHSPNSSYPNSPGS 198
            |||||||||||:.|.||:| ||.::.  ||.||.|.::.:| |   |||..             |
  Fly   219 LPPVLVPRHSEFAPGHSML-QFNHVA--EPSMPHNVSYSNSGF---NSHSL-------------S 264

Human   199 SSSTYPHSPTS--SDPGSPFQMPADTPPPAYLPPEDPMT---QDGSQPMDTNMMAPPLPSEINRG 258
            :|:|...||:|  |:|.||:...|.||||||.|.||..:   .||.|.:|..|           |
  Fly   265 TSNTSVGSPSSVNSNPNSPYDSLAGTPPPAYSPSEDGNSNNPNDGGQLLDAQM-----------G 318

Human   259 DVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTI 323
            ||..|:|.||..|.||.|||||.||||.||.::.||:|||||:||||.:|.|||.||||||||||
  Fly   319 DVAQVSYSEPAFWASIAYYELNCRVGEVFHCNNNSVIVDGFTNPSNNSDRCCLGQLSNVNRNSTI 383

Human   324 ENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEF 388
            ||||||||||||||||.|||||||||||:||||||||||||||||:||||||.||||||||||||
  Fly   384 ENTRRHIGKGVHLYYVTGEVYAECLSDSAIFVQSRNCNYHHGFHPSTVCKIPPGCSLKIFNNQEF 448

Human   389 AQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQ 453
            ||||:||||:|||.|||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   449 AQLLSQSVNNGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQ 513

Human   454 MGSPHNPISSVS 465
            ||||||.|||||
  Fly   514 MGSPHNAISSVS 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMAD1NP_005891.1 MH1_SMAD_1_5_9 9..132 CDD:199814 111/122 (91%)
PRK10263 <133..>244 CDD:236669 52/116 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..248 35/91 (38%)
MH2_SMAD_1_5_9 265..465 CDD:199822 174/199 (87%)
L3 loop. /evidence=ECO:0000269|PubMed:11779505 418..428 9/9 (100%)
MadNP_001259992.1 MH1_SMAD_1_5_9 93..216 CDD:199814 111/122 (91%)
MH2_SMAD_1_5_9 325..525 CDD:199822 174/199 (87%)

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