DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sas-4 and cpap

DIOPT Version :10

Sequence 1:NP_649701.2 Gene:Sas-4 / 40859 FlyBaseID:FBgn0011020 Length:901 Species:Drosophila melanogaster
Sequence 2:XP_031753132.1 Gene:cpap / 100491003 XenbaseID:XB-GENE-1013036 Length:1597 Species:Xenopus tropicalis


Alignment Length:526 Identity:98/526 - (18%)
Similarity:172/526 - (32%) Gaps:147/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 LIGKNACSSTPDLKSSYASSTTASSTSPRVRFVEQKSRAGQTTHADDEASSEASPMTGVCWAKVL 255
            :|.:|.|:....:........|......|:....|....|.|....            :.|....
 Frog   691 VIERNGCTEVEQILKDILHKNTVKLPVARINIAHQPGSGGSTVARQ------------ILWKYKN 743

  Fly   256 D------TQSIKPAQIQRRSAQIR----VEDDSNVSIFELLEQKATEGNID-------------- 296
            |      ..|...||:.....:.|    .|.:..:.:|.|||. ..|..||              
 Frog   744 DLRCAIVNSSYSVAQVCEHIIRFREYEEKEPNKCLPVFLLLED-CDEEYIDDLRHDLGEAMVYKK 807

  Fly   297 MNS--------SCIRTFMARKDQRRRVADDSDHIVVTQQVRQMRLQPQVDQMLVQELQEGDEEDT 353
            ||:        ||.|   :...|:...|...|.:.:|.::...      :|.|.:  .:.:|...
 Frog   808 MNNLKPRFILLSCKR---SNDPQKLCAASSHDTVAITHKLNSK------EQKLFK--AKAEELSA 861

  Fly   354 EPSSDQTLTMTPIQVGNTKVRVRFSDSNDTHEYSDATSLNDGSNIQLFEQFKSALFQALEQKKKS 418
            ..||:..:|...:..|..:..::....|..|:      ::..||:....::.:.|...::....|
 Frog   862 SFSSELIITFVLMSHGFEEKYLKDFVKNVMHD------IDHSSNVTRLIRYVALLNHYVQNSYIS 920

  Fly   419 SPSKE---SDEPITKDLQEKANLVRTRLEE---LETEIATFKEQNAQLLRLRQQHELEKAKCTQD 477
            ....|   ..:|..|:.|:|.||.:.:|::   |::......|:.::.......||..:.:....
 Frog   921 LSHCEEFLGIKPYLKESQQKDNLNKGKLKKQGRLKSSAKQHSEKGSETTSSVSDHEKSRMESLSQ 985

  Fly   478 H--------------MEAME--------RVHDEKIQAEI-------YLH--------DERMKI-- 503
            :              :|..|        |:....|..||       ||.        ||:..:  
 Frog   986 YNFVNSLNNQARLLFIELRESTTWISGIRILHPLIAEEILVQLPRTYLQSKIAMDLLDEKALLCH 1050

  Fly   504 ---EEERRKFEQQMRLQKSNANSKEKKEIAALKQEVEGLQLQLKQKEQAHVSAQARLRAQLRASE 565
               .|:..||.:|:.|::   :.|.:.:|      |:.....|.:    ||.             
 Frog  1051 RFAREDFVKFIRQLFLRR---HKKSRGDI------VDSFFSPLIE----HVC------------- 1089

  Fly   566 KEQRNYRDEIELLRKENKRLE------QELVKIGRENNSKMLQEINRNIARLAPKVLPSATMSDI 624
            |.:.|....|.||....:..:      |:|.:| ..||.|.  |..:..|..|...||:.  |.|
 Frog  1090 KAENNVEMAINLLEVAYEHFDKYPLFAQQLARI-HYNNEKF--EEAKKWAETAKAKLPND--SFI 1149

  Fly   625 LDENGR 630
            ||..|:
 Frog  1150 LDTEGQ 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sas-4NP_649701.2 Smc <435..>654 CDD:440809 50/247 (20%)
YwqK 731..900 CDD:442097
Tcp10_C 821..850 CDD:462118
Tcp10_C 856..884 CDD:462118
cpapXP_031753132.1 SAM_superfamily 9..71 CDD:472832
TadD <1091..1159 CDD:444034 20/70 (29%)
TPR repeat 1112..1142 CDD:276809 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.

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