DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gfzf and Gstz1

DIOPT Version :9

Sequence 1:NP_001014610.1 Gene:gfzf / 40858 FlyBaseID:FBgn0250732 Length:1045 Species:Drosophila melanogaster
Sequence 2:NP_001102915.1 Gene:Gstz1 / 681913 RGDID:1589363 Length:216 Species:Rattus norvegicus


Alignment Length:222 Identity:58/222 - (26%)
Similarity:101/222 - (45%) Gaps:35/222 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   814 LYAVSDGPPSLAVRMTLKALDIQYQLINVDFC--AMEHRSEEYSKMNPQKEIPVLDDDGFYLSES 876
            ||:......|..||:.|....|.|:::.::..  ..:..|||:..:||.|::|.|..||..:.:|
  Rat     8 LYSYFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFSEEFQTLNPMKQVPALKIDGITIGQS 72

  Fly   877 IAIMQYLCDKYAPDSTLYPQDVNVRAVINQRLCFNM---GFYYAPISAHSMAPIFFDYKRTPMSL 938
            :||::|| ::..|...|.|||...||::  |:..::   |.  .|:...|:........:.|.:.
  Rat    73 LAILEYL-EETRPIPRLLPQDPQKRAIV--RMISDLIASGI--QPLQNLSVLKQVGQENQMPWAQ 132

  Fly   939 KKVQNALDVFETYLQRLGTKYAAGENITIADFALISATICL--EAINFDLHQFTLVNKWYETFKV 1001
            |.:.:..:..|..||....||..|:.:::||       :||  :..|            .|.|||
  Rat   133 KAITSGFNALEKILQSTAGKYCVGDEVSMAD-------VCLAPQVAN------------AERFKV 178

  Fly  1002 E---YPQLWEIANSGMQEISAFEQNPP 1025
            :   ||.:..| |..:..:.||:.:.|
  Rat   179 DLSPYPTISHI-NKALLALEAFQVSHP 204

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
gfzfNP_001014610.1 FLYWCH 18..87 CDD:282369
FLYWCH 162..229 CDD:282369
FLYWCH 365..432 CDD:282369
FLYWCH 597..663 CDD:282369
Thioredoxin_like 811..886 CDD:294274 23/73 (32%)
GstA 812..1000 CDD:223698 48/192 (25%)
GST_C_Delta_Epsilon 900..1017 CDD:198287 27/124 (22%)
Gstz1NP_001102915.1 GST_N_Zeta 6..80 CDD:239340 23/72 (32%)
maiA 7..211 CDD:273527 58/222 (26%)
Glutathione binding. /evidence=ECO:0000250 14..19 1/4 (25%)