DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gfzf and Gstt1

DIOPT Version :9

Sequence 1:NP_001014610.1 Gene:gfzf / 40858 FlyBaseID:FBgn0250732 Length:1045 Species:Drosophila melanogaster
Sequence 2:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus


Alignment Length:182 Identity:50/182 - (27%)
Similarity:83/182 - (45%) Gaps:31/182 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   812 MKLYAVSDGPPSLAVRMTLKALDIQYQLINVDFCAMEHRSEEYSKMNPQKEIPVLDDDGFYLSES 876
            ::||......|..|:.:..|..:|.:|:..|:....||.|:.::::||.|::|.:.|.||.|.||
  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCES 67

  Fly   877 IAIMQYLCDKYAPDSTLYPQDVNVRAVINQRLCFNMGFYYAPISAHS--------------MAPI 927
            :||:.||..||......||||:..||.:::.|.:.          |:              |.|:
  Rat    68 VAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQ----------HTTLRRSCLRTLWHKVMFPV 122

  Fly   928 FFDYKRTPMSLKKVQNALDV-----FETYLQRLGTKYAAGENITIADFALIS 974
            |...:..|..|......|||     .:.:||  ...:..|.:|::||...|:
  Rat   123 FLGEQIRPEMLAATLADLDVNVQVLEDQFLQ--DKDFLVGPHISLADVVAIT 172

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
gfzfNP_001014610.1 FLYWCH 18..87 CDD:282369
FLYWCH 162..229 CDD:282369
FLYWCH 365..432 CDD:282369
FLYWCH 597..663 CDD:282369
Thioredoxin_like 811..886 CDD:294274 25/73 (34%)
GstA 812..1000 CDD:223698 50/182 (27%)
GST_C_Delta_Epsilon 900..1017 CDD:198287 19/94 (20%)
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 25/74 (34%)