DRSC/TRiP Functional Genomics Resources

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Protein Alignment gfzf and Vars1

DIOPT Version :9

Sequence 1:NP_001014610.1 Gene:gfzf / 40858 FlyBaseID:FBgn0250732 Length:1045 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:617 Identity:116/617 - (18%)
Similarity:196/617 - (31%) Gaps:238/617 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GDIFRW--TCVRKRDIECTARICTEATLAGAHRLHAVDTDAHIHPHYSAAKLMHMFSKHQIVLVE 250
            |::.||  ||||:.:...   :..|..|                  ||.|:              
  Rat   185 GNVTRWFNTCVRQPEFRA---VLGEVVL------------------YSGAR-------------- 214

  Fly   251 DENTSDVLAECPNLEYFDPENTFDTAQRGDDLESIIIEECEDNYDIYMRTDGSQGGGIQGSEELE 315
                  .:.:.|..|...|:.|  .||...:.:.   .|..:.:....:|...|....:...:.|
  Rat   215 ------SVTQQPGSEITAPQKT--AAQLKKEAKK---REKLEKFQQKQKTQQQQPAHGEKKPKPE 268

  Fly   316 SQEGDDES----SLVDP---KMHHSSKWPAAFD---VIANYLP---------PPSHNPLTETDLT 361
            .:|..|..    .|..|   |...|...|.::.   |.|.:.|         |....|....   
  Rat   269 KKEKRDPGVITYDLPTPPGEKKDVSGTMPDSYSPQYVEAAWYPWWERQGFFKPEYGRPSVSA--- 330

  Fly   362 KFTFLPSAKGRKVLCL-------SQHLFHFDSQSRSNGHMFFTCINRRDKANTCHVRITLDPVEN 419
                 |:.:|..::|:       |.||          ||.....|  :|.....|          
  Rat   331 -----PNPRGVFMMCIPPPNVTGSLHL----------GHALTNAI--QDSLTRWH---------- 368

  Fly   420 GPVVLRINGEHT-HNP--DIKEIARRLKQQAKLDQD---NVHKLQKIEHSEEI-SFESDEGSASQ 477
                 |:.||.| .||  |...||.::..:.||.::   |.|:|.:....:|: .:::::|    
  Rat   369 -----RMRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLQEVWKWKAEKG---- 424

  Fly   478 GGDTFEAENSVDESYGHIDTRNVVMKKV-ISID---GAIKMEPESKANMIVQYLKDGANNISAKI 538
                       |..|..       :||: .|:|   ....|:|:..|.:...:::          
  Rat   425 -----------DRIYHQ-------LKKLGSSLDWDRACFTMDPKLSATVTEAFVR---------- 461

  Fly   539 EILPDALDELDPHSHTAYSSTPLPKVRQPQITNIRRRRDVAEPAKGAQPDMDLSKICTLRSA--- 600
                  |.|    ....|.||.|                             ::..|||.||   
  Rat   462 ------LHE----EGVIYRSTRL-----------------------------VNWSCTLNSAISD 487

  Fly   601 --------KGHELLCVDGYIYHAKNRGVISRNYWVCIKSRDPD---INCKSRISTATQKDGSIRV 654
                    .|..||.|.||....:...::|..|.|  :..|.|   :...:||.|..   |.:.|
  Rat   488 IEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKV--QGSDSDEEVVVATTRIETML---GDVAV 547

  Fly   655 LRVYNSHSHPFSEDDIKRRLYNEINKKNNKNLKFRPLH-FIGKSL-----DQIQQEYGDLAIERL 713
            .      .||      |...|..:..|:       .:| |:.:||     |.:..|:|..|: ::
  Rat   548 A------VHP------KDPRYQHLKGKS-------VVHPFLSRSLPIVFDDFVDMEFGTGAV-KI 592

  Fly   714 NVSNISSDIVVHKKPRVSGSN--NSRSASLSV 743
            ..::..:|..|.::.|:...:  :|:.|.::|
  Rat   593 TPAHDQNDYEVGQRHRLEAISIMDSKGALVNV 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gfzfNP_001014610.1 FLYWCH 18..87 CDD:282369
FLYWCH 162..229 CDD:282369 9/42 (21%)
FLYWCH 365..432 CDD:282369 15/74 (20%)
FLYWCH 597..663 CDD:282369 19/79 (24%)
Thioredoxin_like 811..886 CDD:294274
GstA 812..1000 CDD:223698
GST_C_Delta_Epsilon 900..1017 CDD:198287
Vars1NP_445744.1 GstA <56..203 CDD:223698 7/20 (35%)
GST_C_family 92..213 CDD:295467 11/48 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296 16/82 (20%)
PTZ00419 282..1264 CDD:240411 92/474 (19%)
ValRS_core 335..938 CDD:185677 81/413 (20%)
'HIGH' region 344..354 3/19 (16%)
tRNA-synt_1_2 513..640 CDD:290334 29/137 (21%)
'KMSKS' region 862..866
Anticodon_Ia_Val 938..1075 CDD:153416
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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