DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31248 and speck

DIOPT Version :10

Sequence 1:NP_649696.1 Gene:CG31248 / 40853 FlyBaseID:FBgn0051248 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_995934.1 Gene:speck / 37867 FlyBaseID:FBgn0287831 Length:275 Species:Drosophila melanogaster


Alignment Length:234 Identity:36/234 - (15%)
Similarity:88/234 - (37%) Gaps:57/234 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DGKFEVRSVTHSDLEEALDVLDGSFFLNESVCVACEIN------------LPENRQARLDLRELC 66
            |..:.:..:...|.|..:.:|...||.:|.:....::.            ||:|          |
  Fly    54 DCPYTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDN----------C 108

  Fly    67 RKTALDGVSLLVKEADTGRVVSVSFNKIQYAPPPGEDHFFLKFRNEEVKSPQARRLMDFMIEVDG 131
            ...|::         ..|.::.|..|.:...|.|.:   ..:...:..:.|:.::::..|..|:.
  Fly   109 SYKAVN---------KKGEIIGVFLNGLMRRPSPDD---VPEKAADSCEHPKFKKILSLMDHVEE 161

  Fly   132 RIDVCAMFNMVCFCELM----FLATLPSHERLGLGRSLSQFTIELTKELAEGKGLEDIDDKLRSK 192
            :.::   |::....||:    .|:...::..||:...|::...|..:|    .|:.         
  Fly   162 QFNI---FDVYPDEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRE----NGIN--------- 210

  Fly   193 RPAAVTALWTSRFSQKVGKATDFKVINTVSYSEFEYKGK 231
               ....|.:|.:|.:|.:...|..:..:.:::::.:|:
  Fly   211 ---VYHVLCSSHYSARVMEKLGFHEVFRMQFADYKPQGE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31248NP_649696.1 None
speckNP_995934.1 RimI 181..250 CDD:440224 13/82 (16%)

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