DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10098 and Scrn1

DIOPT Version :10

Sequence 1:NP_649694.1 Gene:CG10098 / 40851 FlyBaseID:FBgn0037472 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001020234.1 Gene:Scrn1 / 502776 RGDID:1560999 Length:414 Species:Rattus norvegicus


Alignment Length:420 Identity:108/420 - (25%)
Similarity:183/420 - (43%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FVVLPENCAEGTLIIGRNA---EDEKNVNVASEVCFYDATE-VLEGKTD-GGASAETGGDMLRVI 66
            ||.||....:|.::.|:|:   .||     ..||.::.|.: ..|.|.: ...|.:.......::
  Rat    10 FVALPPRAKDGLVVFGKNSARPRDE-----VQEVVYFPAVDHEAESKVECTYISIDQVPRTHAIV 69

  Fly    67 LQKPQPGLWGGDFGANERGVALGLTWAAGENEAKDSDSLLGTDIVRLTLAVAKDVDDAVDRIGAL 131
            :.:| ..|||.:.||||.||.:..........|.::::|||.|:|||.|.......:|:|.|.:|
  Rat    70 ISRP-AWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGTTAKEALDIIVSL 133

  Fly   132 VASHGHDNS-----------KLNFIACDAAAAWLVSCSGKVWAAEKLEASFLRLPSGGLAVTTVV 185
            :..||...:           :..::..|...||::...||.||||::... :|.....|::||.:
  Rat   134 LDEHGQGGNYYEDAHSCHSFQSAYLLVDRDEAWVLETVGKYWAAERITEG-VRCICNHLSLTTKM 197

  Fly   186 NK---------SSEGL---DDAASFAAAHDAEAQAPA---VDWCGPKPA---GDGTYTQHDMFET 232
            ::         .|:|.   :|..:|     |:..:||   :|.|..|.:   .:.:.|...|...
  Rat   198 DEEHPELRTYAQSQGWWTGEDEFNF-----AQVFSPADDHLDCCAGKDSLEKQEESITVQTMINI 257

  Fly   233 LRSASNA----SSSRAATVSVLSV----KGISC-HWFTGTPNAAESVFKPFVFAPNPRISPLTQ- 287
            ||..::.    |.|...|.|::||    :...| |:|||||:.:.|:||||:|..:.::.|..| 
  Rat   258 LRDKASGVCIDSESFLTTASIVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQS 322

  Fly   288 --------------VQAEADLT-LLHKLHSQRKPAALE--------------HLRSLELSCVDEL 323
                          .|.:.|.. .|:|.|...: |.:|              .|....|..::|:
  Rat   323 PCFGDDDPAKKEPRFQEKPDRRHELYKAHEWAR-AVIESDQEQGRTLRKTMLELEKQGLEAMEEI 386

  Fly   324 NNYFSLQDHASDELDELLKDCVEAEVKFYR 353
            .:.....|.|  |:.:|..|||:.|:||::
  Rat   387 LSSPEPPDPA--EVGDLFYDCVDTEMKFFK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10098NP_649694.1 PepD 70..>167 CDD:477862 34/107 (32%)
Scrn1NP_001020234.1 PepD 18..>231 CDD:477862 56/224 (25%)

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