DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and SDG16

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_194520.3 Gene:SDG16 / 828904 AraportID:AT4G27910 Length:1027 Species:Arabidopsis thaliana


Alignment Length:331 Identity:97/331 - (29%)
Similarity:134/331 - (40%) Gaps:91/331 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NNNKQVTSSNKIPSSFNAKLELDSSKDD--TIHSTSLNKKLVK---IKKFK------LDDMKEMV 58
            :.:|...:|.|:.||   ||.|:....:  .:|:.:...|:.|   ||:.|      |.:..|.|
plant   525 SKSKNWKTSVKVKSS---KLALEDWMMNLAELHANATAAKVPKRPSIKQRKQRLLAFLSETYEPV 586

  Fly    59 GG------CCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTV-PTGPWYCRKCESQERTSRV 116
            ..      |.||.....|..|.::.|:  .|.:||||.|||...| ....|.|:.||..:  .:.
plant   587 NAKWTTERCAVCRWVEDWDYNKIIICN--RCQIAVHQECYGARHVRDFTSWVCKACERPD--IKR 647

  Fly   117 RCELCPSRDGALKKTD-NSGWAHVVCALYIPEVRFGNVTTMEPI--ILSLIPQERYSKTCYICQE 178
            .|.|||.:.||||.|| .:.|.||.||.:.|||.|.:...|||.  ||| ||...:.|.|.||::
plant   648 ECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILS-IPSTNFVKICVICKQ 711

  Fly   179 IGKPNRANVGACMQCNKSNCKQQFHVTCAQSLG----LLC-EEAGNYLDNVKYCGYCQHH----- 233
            |.       |:|.||.|  |...:|..||...|    |.| |:.|..:  .|...||.:|     
plant   712 IH-------GSCTQCCK--CSTYYHAMCASRAGYRMELHCLEKNGQQI--TKMVSYCAYHRAPNP 765

  Fly   234 ------------------YSKLKKGG----------------NVKTIPPYKPIQHDTSSDSCSSP 264
                              ....||||                |..|..|:       |:..|...
plant   766 DNVLIIQTPSGAFSAKSLVQNKKKGGSRLISLIREDDEAPAENTITCDPF-------SAARCRVF 823

  Fly   265 EKEIDS 270
            :::|:|
plant   824 KRKINS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 17/53 (32%)
ePHD_AF10_like 118..233 CDD:277142 49/122 (40%)
CC_AF10 1636..1699 CDD:411015
SDG16NP_194520.3 PWWP_AtATX3-like 206..310 CDD:438971
PHD_SF 401..451 CDD:473978
PHD_ATX3_4_5_like 594..640 CDD:276970 17/47 (36%)
ePHD_ATX3_4_5_like 649..760 CDD:277133 49/122 (40%)
SET_SETD1-like 872..1023 CDD:380916
Blue background indicates that the domain is not in the aligned region.

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