DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and SDG14

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_191733.3 Gene:SDG14 / 825347 AraportID:AT3G61740 Length:1018 Species:Arabidopsis thaliana


Alignment Length:364 Identity:102/364 - (28%)
Similarity:154/364 - (42%) Gaps:77/364 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TIHSTSLNK-KLVKIKKFKLDDM--KEMVGGCCVCSDERGWPENPLVYCDGQNCTVAVHQACYGI 94
            |:.:..|:| |::.:.:.|.:.:  |.....|.||.....|.||.::.|:  .|.|||||.|||:
plant   518 TLETQMLDKQKMLSLLEEKYEPVRAKWTTERCAVCRWVEDWEENKMIICN--RCQVAVHQECYGV 580

  Fly    95 -VTVPTGPWYCRKCESQ--ERTSRVRCELCPSRDGALKKTDNSG-WAHVVCALYIPEVRFGNVTT 155
             .:.....|.||.||:.  ||.    |.|||.:.||||.:|..| |.||.||.:.|||.|.|...
plant   581 SKSQDLTSWVCRACETPDIERD----CCLCPVKGGALKPSDVEGLWVHVTCAWFRPEVGFLNHEN 641

  Fly   156 MEPII-LSLIPQERYSKTCYICQEIGKPNRANVGACMQCNKSNCKQQFHVTCAQSLGLLCEEAGN 219
            |||.: |..||...:.|.|.||::       ..|:|:.|.|  |...||..||...|...|    
plant   642 MEPAVGLFKIPANSFLKVCTICKQ-------THGSCVHCCK--CATHFHAMCASRAGYNME---- 693

  Fly   220 YLDNVKYCGYCQHHYSKLKKGGNVKTIPPYKPIQHDTSSDSCSSPEK-EIDSTMNSATTSATIIK 283
                 .:|         |:|.|          :|....|..||...| :.||          ::.
plant   694 -----LHC---------LEKNG----------VQRTRKSVYCSFHRKPDPDS----------VVV 724

  Fly   284 ITSSSGSAGGSSNVLNASSSAGISAGSSSGSGVSSSAKQRKSNASSKSSSSSS---SSSSSSTGG 345
            :.:.|| ..||.|:|..      ..|.:.||.:..:.|.:.....:::.:..|   .|.|::...
plant   725 VHTPSG-VFGSRNLLQN------QYGRAKGSRLVLTKKMKLPGFQTQTQAEQSRVFDSLSAARCR 782

  Fly   346 APNPSSSSVHSGSASNMTGGGSVLPGSSNIGNISNSLNN 384
            ..:.|::.:...:.|:...|    |...::..|.| ||:
plant   783 IYSRSNTKIDLEAISHRLKG----PSHHSLSAIEN-LNS 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 19/47 (40%)
ePHD_AF10_like 118..233 CDD:277142 42/116 (36%)
CC_AF10 1636..1699 CDD:411015
SDG14NP_191733.3 PWWP_AtATX3-like 188..292 CDD:438971
PHD_TCF19_like 365..415 CDD:276992
COG5141 <518..>765 CDD:227470 91/306 (30%)
ePHD_ATX3_4_5_like 603..714 CDD:277133 49/147 (33%)
SET_SETD1-like 862..1014 CDD:380916
Blue background indicates that the domain is not in the aligned region.

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