DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and Brpf1

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_006506845.1 Gene:Brpf1 / 78783 MGIID:1926033 Length:1253 Species:Mus musculus


Alignment Length:1113 Identity:231/1113 - (20%)
Similarity:358/1113 - (32%) Gaps:340/1113 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KIPSSFNAKLELDSSKDDTIHSTSLNKKL---------VKIKKFKLD--------------DMKE 56
            |.....:.::|.|..::|.|....:|::.         .:|.::.:|              |...
Mouse   203 KSAEELDEEVEYDMDEEDYIWLDIMNERRKTEGVSPIPQEIFEYLMDRLEKESYFESHNKGDPNA 267

  Fly    57 MV---GGCCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTVPTGPWYCRKCESQERTSRVRC 118
            :|   ..||:|:|......|.:::||  .|.:||||.|||:..:|.|.|.||:| .|..:..|.|
Mouse   268 LVDEDAVCCICNDGECQNSNVILFCD--MCNLAVHQECYGVPYIPEGQWLCRRC-LQSPSRAVDC 329

  Fly   119 ELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPI-ILSLIPQERYSKTCYICQEIGKP 182
            .|||::.||.|:||:..||||||||:||||.|.|...:||| .:..||..|:..|||||::.|. 
Mouse   330 ALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGS- 393

  Fly   183 NRANVGACMQCNKSNCKQQFHVTCAQSLGL------LCEEAGNYLD-NVKYCGYCQHHYSKLKKG 240
                 |||:||:|:||...|||||||..||      :.|...|... :|:...||..|    ...
Mouse   394 -----GACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIH----TPP 449

  Fly   241 GNVKTIPPYKPIQHDTSSDSCSSPEKEIDSTMNSATTSATIIKITSSSGSAGGSSNVLNASSSAG 305
            |:.:.:|   .:.|       |..|:|.|.              ....|.:..|..|..|.:.:.
Mouse   450 GSARRLP---ALSH-------SEGEEEEDE--------------EEDEGKSWSSEKVKKAKAKSR 490

  Fly   306 IS--------AGSSSGSGVSS---------------SAKQRKSNASSKSSSSSSSSSSSSTGGAP 347
            |.        |...:.:.|.|               ...||||....: ..|..:....|..|.|
Mouse   491 IKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKSQFMQR-LHSYWTLKRQSRNGVP 554

  Fly   348 NPSSSSVHSGSASNMTGGGSVLPGSSNIGNISNSLNNNLPGGSSS-------------------- 392
            .......|..|..|          ...:|..|:..|..|.....|                    
Mouse   555 LLRRLQTHLQSQRN----------CEQVGRDSDDKNWALKEQLKSWQRLRHDLERARLLVELIRK 609

  Fly   393 -----------------------------------TSSAGNVPGGSGGIISASSGGATQSTSSQS 422
                                               ....||:          .|.....|..::.
Mouse   610 REKLKRETIKIQQIAMEMQLTPFLILLRKTLEQLQEKDTGNI----------FSEPVPLSEVTEL 664

  Fly   423 STAPG------------TTKSSASS-------------SSSSSNSYK----------------EK 446
            ...|.            |.|.:..:             :...||..|                |:
Mouse   665 DEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQ 729

  Fly   447 HSKSLSKSTSSKDKDGKDSSTNSANNNFTNSSASSTSSNSSSTREKSSSKLSKNKDSNQVPSATS 511
            ....|.::....:|.|.|..|.....:  |.:....|.::....|:....|.:|:....|.....
Mouse   730 GGAVLRQARRQAEKMGIDFETGMHIPH--NLAGDEVSHHTEDAVEEERLVLLENQKHLPVEEQLK 792

  Fly   512 SLSTTSSINTQPSSSTSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSNHAHTLSTNGTGAGSA 576
            .|     :......:.|..:.|        .|..|..:....:.......|......:|......
Mouse   793 LL-----LERLDEVNASKQSVG--------RSRRAKMIKKEMTALRRKLAHQRETGRDGPERHGP 844

  Fly   577 AGKLQSVSNLSNSSSGFGSDLRSVSTSSSSTVNDSTGGFGSNSNSERENLSGAGSS---ASNMPG 638
            :|:    .||:...:....|.::.|.:..|:..:::.|.|.|.:|...:..|..:|   :...|.
Mouse   845 SGR----GNLTPHPAACDKDGQTDSAAEESSSQETSKGLGPNMSSTPAHEVGRRTSVLFSKKNPK 905

  Fly   639 TIAP--GTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKADSAKSTSSIST 701
            |..|  ..|....:..:.::.:.|||...........|.        ..:||......|:||.|.
Mouse   906 TAGPPKRPGRPPKNRESQMTPSHGGSPVGPPQLPIMGSL--------RQRKRGRSPRPSSSSDSD 962

  Fly   702 SGSALEDNNSLISRYDIKDVQVALTPLTDFEKEIEKSSKRQRTELSPPTHQTSATAEVNAPLASS 766
            |..:.||     ...|:        |...|      ||..|..:.|...::.    :.|.|.:||
Mouse   963 SDKSTED-----PPMDL--------PANGF------SSGNQPVKKSFLVYRN----DCNLPRSSS 1004

  Fly   767 TSASIAVTASATAASAPPATGTTTLGSSISGNAGSTSSGNSSGVSATGGAQSAVGSGGYPKTESS 831
            .|.|   ::|:::::|...|.||.                    |..|..:.:...|.:|:..|.
Mouse  1005 DSES---SSSSSSSAASDRTSTTP--------------------SKQGRGKPSFSRGTFPEDSSE 1046

  Fly   832 KSSGT------ASAGSGSGSSSNTSSTKHGSNIKDISSSSNQQASTASSSSAPSLYVSVPLSTAN 890
            .:|||      ...|.|.|.||.....|.|     :..:..|                   ..|:
Mouse  1047 DTSGTENEAYSVGTGRGVGHSSKYPHPKSG-----VLGTQFQ-------------------GLAS 1087

  Fly   891 VPGINLPTSSTSSSTTSESHSASSRSSGAQSQHQQQLSNAL-----------------VGPPMGG 938
            .|..:.|..|.|.....:|   ..|.:|..|:.:....:||                 :.|.| .
Mouse  1088 PPAADPPPLSRSCEVVRKS---LGRGAGWLSEDEDSPLDALDLVWAKCRGYPSYPALIIDPKM-P 1148

  Fly   939 SAGAFHGG 946
            ..|.||.|
Mouse  1149 REGMFHHG 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 20/46 (43%)
ePHD_AF10_like 118..233 CDD:277142 57/122 (47%)
CC_AF10 1636..1699 CDD:411015
Brpf1XP_006506845.1 SFP1 <20..50 CDD:227516
COG5141 173..656 CDD:227470 125/510 (25%)
ePHD_BRPF1 329..449 CDD:277171 58/129 (45%)
Bromo_brd1_like 631..734 CDD:99944 11/112 (10%)
PWWP_BRPF1 1122..1241 CDD:438984 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.

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