DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alh and rno

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_061506527.1 Gene:rno / 4576338 VectorBaseID:AGAMI1_007949 Length:4444 Species:Anopheles gambiae


Alignment Length:2071 Identity:465/2071 - (22%)
Similarity:739/2071 - (35%) Gaps:639/2071 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTVPTGPWYCRKCESQERTSRVRCELCPSRD 125
            |.||........|.:|:||  ||.:.||||||||..:|:|.|.||.|...::.   :|.|||:..
Mosquito   273 CDVCRSPDSEEANEMVFCD--NCNICVHQACYGITNIPSGQWLCRTCSMGQKP---KCVLCPNMG 332

  Fly   126 GALKKTDNSG--WAHVVCALYIPEVRFGNVTTMEPII-LSLIPQERYSKTCYICQEIGKPNRANV 187
            ||:|.| .||  ||||.|||:||||..|:|..||||. :|.||..|::..|.:|:|       .|
Mosquito   333 GAMKST-RSGQKWAHVSCALWIPEVSIGSVDRMEPITKISNIPSSRWALVCALCRE-------RV 389

  Fly   188 GACMQCNKSNCKQQFHVTCAQSLGLLCE---EAGNYLDNVKYCGYCQHH---------------- 233
            |||:||:...||..:|||||...||...   |..|..|.||...|||.|                
Mosquito   390 GACIQCSVKTCKTAYHVTCAFQHGLEMRAIIEDENAEDGVKLRSYCQKHGENKGKRDNSRNNTKS 454

  Fly   234 ----------------------------------------------------------------- 233
                                                                             
Mosquito   455 ATGSGVSEDETGNAGAGTNAASGGGGGGAGTGSGGNTGGDVKRRKRKDMTSEERNLARAARQQEI 519

  Fly   234 ----------------------------YS----KLKKGGNVKTIPPYKPIQHDTSSDSCSSPEK 266
                                        |:    |.|.|.|...:|| |..:.|.::.:....|.
Mosquito   520 EAEFDKHVSVKDISCHLLDVDQEGIYHIYNYWILKRKAGHNRPLLPP-KTDEVDPNAQNQEQAEI 583

  Fly   267 E-----------------------------------IDSTMNSATTSATIIKITSSSGSAG-GSS 295
            |                                   .:.|.|....:.|..:  |.||.|| |::
Mosquito   584 EKMKTFVHLRQDLERVRNLCYMVSRREKLSRSFFRMREQTFNKQVAALTAFR--SGSGGAGEGAT 646

  Fly   296 N------------------VLNASSS----------------------------AGISAGSSSGS 314
            |                  :|:|:..                            :|::: |:||.
Mosquito   647 NHQRSGSLLSHVDPTMLEAILHANHGPTIYDRLYSCNSVSSTMPTLDEMVVRIVSGVNS-SNSGI 710

  Fly   315 GVSSSAKQRKSNASSKSSSSSSSSSSSSTGGAPNPSSSSV--HSGSASNMTGGGSVLPGSSNIGN 377
            .:|.|...:|:.|::.|::::::::.:|...|...|:|:.  |:|||     |.|....|.:..:
Mosquito   711 SISGSRDGKKATAAASSAAAAAATAVASAAAAAAASASATVGHNGSA-----GSSSSSSSGSYSS 770

  Fly   378 ISNSLNNNLPGGSSSTSSAGNVP-----------------------------GGSGGIISASSGG 413
            .|:|.:.:....|||:||:.:.|                             |...|:....|.|
Mosquito   771 SSSSSSGSSSSSSSSSSSSSSTPANKQTSKAVSKKQAEPLLIHEQQPGKKLAGDVNGVRQQQSVG 835

  Fly   414 ATQSTSSQSSTA----PGTTKSSASSSSSSSNSYKEKHSKSLSKSTSSKDKDGKDSSTNSANNNF 474
            ..|.|.:|.:.|    |.....:|...|:|::|..|..:          |.|..|..|..|:...
Mosquito   836 GNQRTKNQLAAAKRQQPPYINGTAGRRSTSNSSASEMEN----------DDDDDDDGTQRADKTN 890

  Fly   475 T-------------------------NSSASSTSS----NSSSTREKSSSKLSKNKDSNQVPSAT 510
            |                         .|||..:|:    :|||..|:..|:|..:.:.:....|.
Mosquito   891 TKKKPRQTKVVERKRRKAASTAGAAITSSAEKSSARSIDDSSSDEERPESRLRPSSERSGTGGAA 955

  Fly   511 --SSLSTTSSINTQPSSSTSTATAGSGGTGTH------------VSSSAASGLNSAPSTTNEHSN 561
              :......:......::|:||.||||....|            :....|....:...|.::.||
Mosquito   956 KLAKAGAGGAAGADKMATTTTAAAGSGRAAGHAKKDFRNQSLRQMERELADDRRAMHLTDDDDSN 1020

  Fly   562 HAHTLSTNGTGAGSAAGKL-QSVSNLSNSSSGFGS-------DLRSVSTSSSSTVNDSTGGFGSN 618
            .:..|.....|:|..||:. .:.|..|.:.||.||       .:..:.:.|.||..|.|....|:
Mosquito  1021 DSDELMHIRPGSGGTAGRSGTAASATSAAGSGGGSVPSARGKKIPDIYSDSDSTDRDKTDHTASD 1085

  Fly   619 SNSERENLSGA------GSSASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSS----TANSL--- 670
            |.........|      ...|..|... :|...|.::|||..     |||:.:    |..|:   
Mosquito  1086 SQQHPFRTKAAMKEFNLQQEADRMKQK-SPTKAGRATSAAAG-----GGSAPAATMPTVTSMALP 1144

  Fly   671 --TSTSTSSGSSSNSSSKKRKADSAKSTSSISTSGSALEDNNSLISRYDIKDVQVALTPLTDFEK 733
              |.||...|:..:||:|       .:|::.|.|.:.|.|                         
Mosquito  1145 VATPTSALPGAKVSSSTK-------LATAATSASSTVLPD------------------------- 1177

  Fly   734 EIEKSSKRQRTELSPPTHQTSATAEVNAPLASSTSASIA---------------VTASATAASAP 783
              ...|||          .|::|.|..||.:.|.:||.|               ..|....|..|
Mosquito  1178 --AAGSKR----------STASTVEHVAPTSKSAAASRAGGSSTKEGHTGGTKKKQAQQPTAEKP 1230

  Fly   784 ---PATGTTTLGSSISGNAGSTSSGNSSGVSATGGAQSAVGSGGYPKTESSKSSGTASAGSGSGS 845
               .||.|||..|| ||.:|::::.:|:|.:::...:........|:.|::|.:......:.||:
Mosquito  1231 TDTSATNTTTTSSS-SGRSGASTNSSSTGAASSKKMEFLADFMVVPQREAAKKAAENMMKTSSGT 1294

  Fly   846 SSNTSSTKHGSNIKDISSSSNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESH 910
            ..:::||...::....|.:|...:|||:|:|| :|..:...|...||.::....|:|||::|.|.
Mosquito  1295 IVSSASTGGSASAAVASVASMNSSSTATSASA-ALISAGAASRKQVPVVDREAGSSSSSSSSSSS 1358

  Fly   911 SASSRSSGAQSQHQQQLSNALVGPPM-----GGSAGAFHGGTTSAGSSSVIQQQSGKSSPALGTL 970
            |.||.||.:.|:.... :.::||...     ||.|........|:.||:..||:|        ::
Mosquito  1359 STSSSSSNSSSEGSAS-TVSVVGTGSTKVDGGGDADLVPPEGVSSSSSANNQQKS--------SI 1414

  Fly   971 VSGNSGGSIISASGFPLPSGNLTATTTESGNLKISYEKQTTRVQQLQEQEAPPARRSRSRSGESG 1035
            ||..||..:.|.|.                             :..:|.|......:.|.||::.
Mosquito  1415 VSNTSGSGVGSGSN-----------------------------RNRKEAEPKVGATAASASGKAN 1450

  Fly  1036 SSHHHAHAHHHHHHPTHHNSHHQQNPQQQQQLHQQQQQNASSHMHACTNSSSSTSTSTTSSSLSG 1100
            .....|.|       |:..::..:.|.......:...:::||...|..|.|...||. |...|| 
Mosquito  1451 KRSTGAGA-------TNSKANKPKEPAADSVAPKVDAKSSSSAAAAARNKSKERSTG-TDKPLS- 1506

  Fly  1101 GTAPATSSSNSKGPSRSGKKRGAAMNKSESTSVATTATPATV-AATPAE--KQSRHSSPHYSA-- 1160
            |||.:|:::.::..:...:::........::.|..:|..||| ...||:  ||.|.:.|...|  
Mosquito  1507 GTASSTAAAAARSTATKEQQKAKDRLADNASPVPVSAEKATVEKGKPAKEAKQKREAQPEIFAYV 1571

  Fly  1161 --------------TPTPPPTST---------LPPVVSSPVVMLQSLSSSSIDSPPATAAAG--- 1199
                          :....|:.|         ||.|..:||.             |:.|:||   
Mosquito  1572 PQRQAAKKAAEHIKSGLGKPSGTEQTAVSDEKLPMVTPTPVA-------------PSKASAGTKA 1623

  Fly  1200 ATSNSRNTRNNSSNGNHNGEQTSSSSSSSSSSSSGGGGTSGAANVVNLLDSPVNMSASGNYRSSS 1264
            |.|.:::.|.:::....:...:||||..|||||.....:||:.:     :...:.......:...
Mosquito  1624 AASKAKDDRKSNAAAGSSSSNSSSSSGGSSSSSCSSSSSSGSES-----EDDDDEEEEEKKKKDE 1683

  Fly  1265 NSTGNA--LPAASSNASQAKPLNKKMLRAQQTQLYQQQQQQQQYAP-----PARSISPTNLSSAS 1322
            .:||.|  .||.:|:.|:|........:|:|.....|:..:|:..|     ||||:|.::.||:|
Mosquito  1684 ATTGPAGKKPATASSRSKATTAAAPSAKAKQPPQPAQRTVRQEVLPFLDKGPARSVSESSSSSSS 1748

  Fly  1323 ASNSASLTHLQQQQQSHQQHEDLEILQFTNTNTTASSNTPTSK---PNNRTLDLSTA-----SAS 1379
            :|:|.|.:.......|..|....|.     .:|:....||.:.   ..||...:|.|     :.|
Mosquito  1749 SSSSGSSSDSDSDSSSSNQSSQEEA-----NDTSVVPPTPAASGAAGRNRRKSVSAAVKQQDAVS 1808

  Fly  1380 SSSPSAVPATTSPLVVLSNQLPLNSVAASSSTGGLKFTYESQTQMDVPMMPVSAIKDSPPSSPGS 1444
            ...|:..|.|.:     :.:.|..|...||:|     |..|.:..|     ....||.|.::.||
Mosquito  1809 PKKPTVAPGTNN-----NRKGPAASGRKSSTT-----TTASSSLSD-----AEDAKDLPSTAAGS 1858

  Fly  1445 EIGSAMHSATTAPGSLTGASTAATAQPGNVRKRGRKAKDATIAAAAAAA---------AAAAALS 1500
            :..:|.....|.  :.:|.........||..:......|.|....|..:         .|||:|.
Mosquito  1859 KQTAAKVGKETT--NRSGKEKQEKPAKGNDEESSVPVADITGPVGAEKSITNRRNSYQPAAASLL 1921

  Fly  1501 NSQQDLKDVRILQNGASNTPGNPAG--------STPTPPATPASSNAVSSASSIITHTAAHMLGN 1557
            .::..||     :.|...:....||        |:..||..|::.||                  
Mosquito  1922 PNETPLK-----RGGRRQSVFVSAGDLEEKQRKSSLVPPDVPSNRNA------------------ 1963

  Fly  1558 QINPNSSVAQKLSEQLHMEVQDHS----------IYTPDSMNSQYAGV----------------P 1596
                   ..:|.|||...|.||.|          ..|.|:...:.|.:                |
Mosquito  1964 -------SRRKASEQAETEKQDDSHAEAKKSAKKTDTADAAVEKEAVLEDTISSKRPLGDEQQSP 2021

  Fly  1597 FPGKQRN--------STAVPS-NATPAQNPLQSMFSGGGMNGNMPIPQSLEQLLERQWEQGSQFL 1652
            ...|:|:        :.|.|| .||.|:.||:            |.|...|. .|.|.|..::.|
Mosquito  2022 VARKRRSPKLSTEAETVASPSVGATEAKEPLK------------PPPTEAEG-KEAQKELENKSL 2073

  Fly  1653 MEQAQHFDIASLLNCLHQLQSENLRLEEHVTSLIARRDHLLAVNARLQIPLSTIAS 1708
            .......|..|||.  .:..::..:::|.:.:....:.....|:..|:...||:.:
Mosquito  2074 GSSVAGSDAISLLT--DEDSADQRKVKEQILAATPTKADADQVSPSLEGGSSTVVA 2127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 22/45 (49%)
ePHD_AF10_like 118..233 CDD:277142 57/120 (48%)
CC_AF10 1636..1699 CDD:411015 11/62 (18%)
rnoXP_061506527.1 None

Return to query results.
Submit another query.