DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and CG15439

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_608836.1 Gene:CG15439 / 33651 FlyBaseID:FBgn0031606 Length:1008 Species:Drosophila melanogaster


Alignment Length:898 Identity:200/898 - (22%)
Similarity:303/898 - (33%) Gaps:303/898 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CCVCSDERGWPENPLVYCDGQNCTVAVHQACYGI----------VTVPTGPWYCRKCESQERTSR 115
            ||||..||....|.:|.||  :|.|:||:.|||:          .|..|.||:|..|.:  ..|.
  Fly   121 CCVCLGERSDDVNEIVECD--SCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACRA--GVSE 181

  Fly   116 VRCELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPIILSLIPQERY-SKTCYICQEI 179
            ..|||||::.|..|:||...|.|::||||:|.|.||.|..:..:.|..:...:: :|.|.:|:  
  Fly   182 PDCELCPNKGGIYKETDVGKWVHLICALYVPGVAFGEVEQLSSVTLFEMQYSKWGAKVCSLCE-- 244

  Fly   180 GKPNR--ANVGACMQCNKSNCKQQFHVTCAQSLGLLCEEAGNYLDNV--KYCGYCQHHYSK---L 237
               |.  |..|.|:.|:...||..|||||||..|.|.|  .::.|:.  .:..:|:.|..|   .
  Fly   245 ---NALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLIE--AHHEDDAADPFYAHCKVHSEKEMIK 304

  Fly   238 KKGGNVKTI----------------------PPYKP-----------IQH--------------- 254
            |:..|..|:                      |...|           |||               
  Fly   305 KRRRNYHTLRLNMMQRAREKEALAAEHETPAPHPNPAQARIQRKLLKIQHKYTRHKELKPTPWVP 369

  Fly   255 --------DTSSDSCSS--PEKEI-----------DSTMNSAT--------TSATIIKIT----- 285
                    .||:.:|..  .:.||           ::.:|:.|        ..|..::.|     
  Fly   370 TQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQREAHINALTDIRKKWHIAPAFSVEFTAYYMD 434

  Fly   286 ----------------SSSGSAGGSSNVLNASSSAGISAGSSSGSGVSSSAKQRKSNASSKSSSS 334
                            |.:.......:||.|.              ..::.::||:..::|.|..
  Fly   435 RIVRMDDFRQQQRELISHNAILSKDQDVLRAQ--------------YDTALEERKAVKATKDSLL 485

  Fly   335 SSSSSSSSTGG--APN-----------------PSSS---------SVHSGSASNMTGG---GSV 368
            :|..|..:..|  |||                 |.:|         ||.:.:|..|..|   |.:
  Fly   486 TSIKSLHTALGQIAPNMTLPSVDLIAHPLPEAPPKTSTPTPPQRPISVPTAAALKMGVGFPLGHL 550

  Fly   369 LPGSSNIGNISNSLNNNLPGGSSSTSSAG--NVPGGSGGIISASSG------------------- 412
            .|..|.:.: |..|:.:...|..|||||.  ..|..|.||...|..                   
  Fly   551 GPPGSKMDS-SRMLSTHAKQGKHSTSSASVEAAPSVSCGICKRSKDQHLLVKCDTCNLHYHLGCL 614

  Fly   413 GATQSTSSQSSTAPGTTKSSASSSSSSSNSYKEKHSKSLSKSTSSKDKDG--------------- 462
            ....:...:.|...|...|.....|..|::..| .|....||.:..:|||               
  Fly   615 NPPLTRPPKKSKQYGWQCSECCDKSEGSDAVTE-ISSGPRKSRTRFNKDGHLVYVDRYSLDDIPV 678

  Fly   463 ------KDSSTNSANNNFTNSSASSTSSNSSSTREKSSSKLSKNKDSNQVPSATSSLSTTSSINT 521
                  |:|.|..|.|.  :..|.:.......|:.....||       |.|..|       .||.
  Fly   679 AAVNVPKESHTKRALNK--SLPAPAPEYIEDLTKSPKRPKL-------QSPCKT-------PINV 727

  Fly   522 QPSSSTSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSNHAHTLSTNGTGAGSAAGKLQSVSNL 586
            ...:.|.|..|..      |::|||:     |:.       |.||.|..|...:.:|...|:.:.
  Fly   728 PAENVTPTTDAAP------VAASAAT-----PAA-------APTLPTPNTIVINLSGCEDSIDDS 774

  Fly   587 SN--SSSGFGSDLRSVSTSSSSTVNDSTGGFGSNSNSERENLSGAGSSASNMPGTIAPGTGGVSS 649
            |.  |..|...|......:.||....|.|........:|.:|                      .
  Fly   775 SGKLSRKGKRKDKHKNKHNLSSDTEKSIGKEHKRKRKKRAHL----------------------D 817

  Fly   650 SAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSS-------SKKRKADSAKSTSSISTSGSALE 707
            .::|:|. |.|.:|.||...:.......|..:..|       :..|..|.|...:|:.|    :|
  Fly   818 ESSTHLD-NAGNTSGSTIKIIFKALRLPGEDAPESQYFYVPANAVRSVDEASRPTSVET----VE 877

  Fly   708 DNNSLISRYDIKDVQVALTPLTDFEKEIEKSSKRQRTELSPPTHQTSATAEVN 760
            |:        ::..:.||.|:.     :..:|.::..|    ..:|:|:|.||
  Fly   878 DS--------VQGAEQALAPIV-----LPAASPQKVRE----PKETAASASVN 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 22/55 (40%)
ePHD_AF10_like 118..233 CDD:277142 43/119 (36%)
CC_AF10 1636..1699 CDD:411015
CG15439NP_608836.1 PHD1_PHF14 120..175 CDD:277036 22/55 (40%)
ePHD_PHF14 184..297 CDD:277144 43/119 (36%)
PHD2_PHF14 586..635 CDD:277037 7/48 (15%)
PRK10819 854..>938 CDD:236768 17/81 (21%)
PHD3_PHF14 949..997 CDD:277038
Blue background indicates that the domain is not in the aligned region.

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