DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and Mllt6

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_038943652.1 Gene:Mllt6 / 303504 RGDID:1306689 Length:1111 Species:Rattus norvegicus


Alignment Length:1608 Identity:428/1608 - (26%)
Similarity:561/1608 - (34%) Gaps:622/1608 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 MKEMVGGCCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTVPTGPWYCRKCESQERTSRVRC 118
            |||||||||||||||||.|||||||||..|:|||||||||||.||||||:|||||||||.:||||
  Rat     1 MKEMVGGCCVCSDERGWAENPLVYCDGHACSVAVHQACYGIVQVPTGPWFCRKCESQERAARVRC 65

  Fly   119 ELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPIILSLIPQERYSKTCYICQEIGKPN 183
            ||||.:|||||:|||.||||||||||||||:|.||.|||||:|..:|.:|::||||||:|.|:.:
  Rat    66 ELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRES 130

  Fly   184 RANVGACMQCNKSNCKQQFHVTCAQSLGLLCEEAGNYLDNVKYCGYCQHHYSKLKKGGNVKTIPP 248
            :|..||||.||:..|:|.|||||||..||||||....:|||||||||::|:||:|          
  Rat   131 KAASGACMTCNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFSKMK---------- 185

  Fly   249 YKPIQHDTSSDSCSSPEKEIDSTMNSATTSATIIKITSSSGSAGGSSNVLNASSSAGISAGSSSG 313
                                                ||...|.||          .|...|.|.|
  Rat   186 ------------------------------------TSRHSSGGG----------GGAGGGGSGG 204

  Fly   314 SGVSSSAKQRKSNASSKSSSSSSSSSSSSTGGAPNPSSSSVHSGSASNMTGGGSVLPGSSNIGNI 378
            ||                      |.:|..||.                ||||    |||     
  Rat   205 SG----------------------SGTSGGGGG----------------TGGG----GSS----- 222

  Fly   379 SNSLNNNLPGGSSSTSSAGNVPGGSGGIISASSGGATQSTSSQSSTAPGTTKSSASSSSSSSNSY 443
                 |:...|..|.|:                     |.|:|....|...:.....|.......
  Rat   223 -----NSFLSGRRSRSA---------------------SPSTQQEKHPTHHEKGQKKSRKDKERL 261

  Fly   444 KEKHSKSLSKSTS--------SKDKDGKDSSTNSANNNFTNSSASSTSSNSSSTREKSSSKLSKN 500
            |:||.|......|        :.|   |.|:|.|:::.      :||...|.|:|:....|.|.:
  Rat   262 KQKHKKRPESPPSILAPPVVPTAD---KVSATTSSHHE------ASTQETSESSRDSKGRKSSSH 317

  Fly   501 KDSNQVPSATSSLSTTSSINTQPSSSTSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSNHAHT 565
            ..|::.....|....:|..:...|||:|::::.|||.    ...|.|.|.|:|..          
  Rat   318 SLSHKGKKLGSGKGVSSFTSASSSSSSSSSSSSSGGP----FQPAGSSLQSSPDF---------- 368

  Fly   566 LSTNGTGAGSAAGKLQSVSNLSNSS-----------------------------SGFGSDLRSVS 601
                     :|..||:...:...|.                             ||||..:|..:
  Rat   369 ---------AAFPKLEQPEDDKYSKPPAPTPPAPPSPTIPEPPKADLFEQKVVFSGFGPIMRFTT 424

  Fly   602 TSSSSTVNDSTGGFGSNSNSERENLSGAGSSASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSST 666
            |:|||    |.....|..:.:..::||:|:||                                 
  Rat   425 TTSSS----SRARAPSPGDYKSPHVSGSGTSA--------------------------------- 452

  Fly   667 ANSLTSTSTSSGSSSNSSSKKRKADSAKSTSSISTSGSALEDNNSLISRYDIKDVQVALTPLTDF 731
                            .|.|:..|.||       |.|.|.|                  .|.|..
  Rat   453 ----------------GSHKRMPALSA-------TLGPAEE------------------APETTL 476

  Fly   732 EKEIEKSSKRQRTELSPPTHQTSATAE-VNAPLASSTSASIAVTASATAASAPPATGTTTLGSSI 795
            :::..|:|||.|.  .|...:.|...| ...|.||..:|.:   |..||.:|.|.:|.:.:.|.:
  Rat   477 KEKKHKASKRSRH--GPGRPKGSRGKEGATGPTASLPAAQL---AGFTATAASPFSGGSLVSSGL 536

  Fly   796 SGNAGSTSSGNSSGVSATGGAQSAVGSGGYPKTESSKSSGTASAGSGSGSSSNTSSTKHGSN-IK 859
            .|.|..| .|.|..:.:.......:|:|.|                    :||.....||.. ::
  Rat   537 GGLAPRT-FGPSGSLPSLSLESPLLGAGIY--------------------TSNKDPISHGGGMLR 580

  Fly   860 DISSS--SNQQASTASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSESHSASSRSSGAQSQ 922
            .:.|:  |:.......:|:.|.|..|...||       ||:||.|.|||.....|.|..|...|.
  Rat   581 AVCSTPLSSSLLGPTGTSALPRLSRSPFTST-------LPSSSASISTTQVFSLAGSTFSLPASH 638

  Fly   923 HQQQLSNALVGPPMG------GSAGAFH------------GGTTSAGSSSVIQQQSGKSSPALGT 969
                    :.|.|||      ..|.:.|            .||:...|.|.:...|  |.|||..
  Rat   639 --------IFGTPMGTVNPLLTQAESSHTEPDLEDCSFRCHGTSPQESLSSMSPIS--SLPALFD 693

  Fly   970 LVSGNSGGSIISASGFPLPSGNLTATTTESGNLKISYEKQTTRVQQLQEQEAPPARRSRSRSGES 1034
            ..|...||            |.|.:|.           ..||.::||.|::.         .||:
  Rat   694 QTSAPCGG------------GQLDSTA-----------PGTTNMEQLLEKQG---------DGEA 726

  Fly  1035 GSSHHHAHAHHHHHHPTHHNSHHQQNPQQQQQLHQQQQQNASSHMHACTNSSSSTSTSTTSSSLS 1099
            |.:                      ..:..:.||..|::|                 ......:.
  Rat   727 GVN----------------------IVEMLKALHALQKEN-----------------QRLQEQIL 752

  Fly  1100 GGTAPATSSSNSKGPSRSGKKRGAAMNKSESTSVATTATPATVAATPAEKQSRHSSPHYSATPTP 1164
            ..||.              |:|...:|...|...     ||..||.||           :..|.|
  Rat   753 SLTAK--------------KERLQILNVQLSVPF-----PALPAALPA-----------ANGPVP 787

  Fly  1165 PPTSTLPPVVSSPVVMLQSLSSSSIDSPPATAAAGATSNSRNTRNNSSNGNHNGEQTSSSSSSSS 1229
            .|...||...||     .|||.|.  |||.....|..    ||.:.||...|:|..:.||||.|.
  Rat   788 GPYGLLPQAGSS-----DSLSISK--SPPGKNCLGLD----NTLSTSSEDPHSGCPSRSSSSLSF 841

  Fly  1230 SSS------------------------------SGGGGTSGAANVVNLLDSPVNMSASGNYRSSS 1264
            .|:                              :|.|...|||.:..:   |:.....|....|.
  Rat   842 HSTPPPLPLLQQSPATLPLALPGAPAPLPPQPQNGLGRAPGAAGLGAM---PMAEGLLGGLAGSG 903

  Fly  1265 NSTGNAL-----------PAASSNASQAKPLN----KKMLRAQQTQLYQQQQQQQQYAPPARSIS 1314
            :...|.|           ||..|.|..|..|.    ...|..||..|.|||:||.|         
  Rat   904 SLPLNGLLGGLNGAAAPNPAGLSQAGGAPTLQLPGCLNSLTEQQRHLLQQQEQQLQ--------- 959

  Fly  1315 PTNLSSASASNSASLTH---LQQQQQSHQQHEDLEILQFTN------TNTTASSNTPTSKPNNRT 1370
              .|....||...:..|   :.|..|..||..:|:.||...      .:..|.|:||.       
  Rat   960 --QLQQLLASPQLTPEHQTVVYQMIQQIQQKRELQRLQMAGGSQLPMASLLAGSSTPL------- 1015

  Fly  1371 LDLSTASASSSSPSAVPATTSPLVVLSNQLPLNSVAASSSTGGLKFTYESQTQMDVPMMPVSAIK 1435
                   .|:.:|..:|..::|                                  |::|..|: 
  Rat  1016 -------LSAGTPGLLPTASAP----------------------------------PLLPAGAL- 1038

  Fly  1436 DSPPSSPGSEIGSAMHSATTAPGSLTGASTAATAQPGNVRKRGRKAKDATIAAAAAAAAAAA--- 1497
                               .||.  .|::|:..|                 |||||||.|||   
  Rat  1039 -------------------VAPS--LGSNTSLMA-----------------AAAAAAAVAAAGGP 1065

  Fly  1498 ----ALSNSQQDLKDVRILQNGASNTPGNPAGSTPTPPATPASSNAVS 1541
                |.:|....|.       ||..:.....|...|.|..|..|...|
  Rat  1066 PVLTAQTNPFLSLP-------GADASGNGSKGGVSTGPGPPIYSYGTS 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 40/46 (87%)
ePHD_AF10_like 118..233 CDD:277142 77/114 (68%)
CC_AF10 1636..1699 CDD:411015
Mllt6XP_038943652.1 PHD_AF10_AF17 7..54 CDD:277049 40/46 (87%)
ePHD_AF17 61..185 CDD:277179 83/123 (67%)
CC_AF10 714..768 CDD:411015 15/115 (13%)
Blue background indicates that the domain is not in the aligned region.

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