DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alh and Jade1

DIOPT Version :10

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_006500847.1 Gene:Jade1 / 269424 MGIID:1925835 Length:849 Species:Mus musculus


Alignment Length:739 Identity:166/739 - (22%)
Similarity:242/739 - (32%) Gaps:219/739 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 CCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTVPTGPWYCRKCESQERTSRVRCELCPSRD 125
            |.||....|...|.:|:||  .|.:.||||||||:.||.|.|.||.|....:.   :|.|||.:.
Mouse   222 CDVCQSPDGEDGNEMVFCD--KCNICVHQACYGILKVPEGSWLCRTCALGVQP---KCLLCPKKG 281

  Fly   126 GALKKTDNSG--WAHVVCALYIPEVRFGNVTTMEPII-LSLIPQERYSKTCYICQEIGKPNRANV 187
            ||:|.| .||  |.||.|||:||||..|:...||||. :|.||..|::..|.:|.|       ..
Mouse   282 GAMKPT-RSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNE-------KF 338

  Fly   188 GACMQCNKSNCKQQFHVTCAQSLGL-----LCEEAGNYLDNVKYCGYCQHHYSKLKKGGNVKTIP 247
            ||.:||:..||:..||||||...||     |.|.     |.||:..||..|.|..|         
Mouse   339 GASIQCSVKNCRTAFHVTCAFDRGLEMKTILAEN-----DEVKFKSYCPKHSSHRK--------- 389

  Fly   248 PYKPIQHDTSSDSCSSPEKEIDSTMNSATTSATIIKITSSSGSAGGSSNVLNASSSAGISAGSSS 312
                            ||:                                      |:..|::.
Mouse   390 ----------------PEE--------------------------------------GLGEGAAQ 400

  Fly   313 GSGVSSSAKQRKSNASSKSSSSSSSSSSSSTGGAPNPSSSSVHSGSAS---------------NM 362
            .:|...|:.|                |.....|:..|:....|..|..               |:
Mouse   401 ENGAPESSPQ----------------SPLEPYGSLEPNREEAHRVSVRKQKLQQLEDEFYTFVNL 449

  Fly   363 TGGGSVLPGSSNI-------GNISNSLNNNLPGGSSSTSSAGNVPGGSGGIISASSGGATQSTSS 420
            ......|.....:       ..:...:|.|.|..:.......|:......::.......|.....
Mouse   450 LDVARALRLPEEVVDFLYQYWKLKRKINFNKPLITPKKDEEDNLAKREQDVLFRRLQLFTHLRQD 514

  Fly   421 ----QSSTAPGTTKSSASSSSSSSNSYKEKHSKSLSKSTSSKDKDGKDSSTNSANNN--FTNSSA 479
                ::.|...|.:.....|..   ..:|:.....:|....:...|..||.:||..|  |.||.:
Mouse   515 LERVRNLTYMVTRREKIKRSVC---KVQEQIFTQYTKLLEQEKVSGVPSSCSSALENMLFFNSPS 576

  Fly   480 SSTSS-----------------------------------NSSSTREKSSSK---LSKNKDSNQV 506
            ...::                                   |||.|..|:|.|   |...::..:|
Mouse   577 VGPNAPKIEDLKWHSAFFRKQMGTSLVHPLKKSHKRDAVQNSSGTEGKTSHKQPGLCGRREGLEV 641

  Fly   507 PSATSSLSTTSS-----INTQPSSSTSTATAG------------SGGTGTHVSSSAASGLNSAPS 554
            ..:..||..|.:     .:.|..:...|...|            .|.........:...|.|. .
Mouse   642 SESLLSLEKTFAEARLLSSAQQKNGVVTPDHGKRRDNRFHCDLVKGDLKDKSFKQSHKPLRST-D 705

  Fly   555 TTNEHSNHAHTLSTNGTGAGSAAGKLQSVSNLSNSSSGFGSDLRSVSTSSSSTVNDSTGGFGSNS 619
            |:..|.::....::.|.|. ||.|..:.:....|.|      |..|..:.:|.|. |.|||....
Mouse   706 TSQRHLDNTRAATSPGVGQ-SAPGTRKEIVPKCNGS------LVKVPITPASPVK-SWGGFRIPK 762

  Fly   620 NSERENLSGAGSSASNMPGTIAPGTGGVSSSAATNLSTNKGGSSSSTANSLTSTSTSSG------ 678
            ..||:....|...|.:            ..|..::|..::..:.....:.|.:.|.:.|      
Mouse   763 KGERQQQGEAHDGACH------------QHSDCSHLGVSRAPAKERAKSRLRADSENDGYAPDGE 815

  Fly   679 -SSSNSSSKKRKADSAKSTSSIST 701
             |.|.|.:.::|...|.||.|..|
Mouse   816 MSDSESEASEKKCIHASSTISRRT 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 23/45 (51%)
ePHD_AF10_like 118..233 CDD:277142 53/122 (43%)
CC_AF10 1636..1699 CDD:411015
Jade1XP_006500847.1 COG5141 115..>543 CDD:227470 103/420 (25%)
ePHD_JADE 274..384 CDD:277141 53/122 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.