DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alh and T19D12.1

DIOPT Version :9

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:NP_001293517.1 Gene:T19D12.1 / 24104905 WormBaseID:WBGene00020576 Length:1844 Species:Caenorhabditis elegans


Alignment Length:1919 Identity:401/1919 - (20%)
Similarity:688/1919 - (35%) Gaps:503/1919 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TVPTGPWYCRKCESQERTSRVRCELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPII 160
            |.|:.|..|..|.:|............::...||..|:  :.:.....||..|:  |:|:.....
 Worm    41 TTPSPPPVCPTCPTQTAQCNTNLFSISTQVNNLKWNDD--YNNTNSPAYIDAVK--NITSALTAT 101

  Fly   161 LSLIPQERYSKTCYICQEIGKPNRANV--GACMQCNKSNCKQ--QFHVTCAQSLGLL-CEEAGNY 220
            |:.......|...|....:...|..||  .|..|.:.::...  ...::....||.: .::..|.
 Worm   102 LNTGLNTASSSGFYRVLAVSTTNNVNVQISALRQGSDNSVVAIGNGAISSTSDLGQMPTDKNVNS 166

  Fly   221 L---DNVKYCGYCQHHYSKLKKGGNVKTIP---PYKPIQHDTSSD----SCS------------S 263
            :   ||..|              .:|.|.|   ....||.|..|.    :||            |
 Worm   167 VITSDNTTY--------------SDVTTAPQACDKTIIQSDCPSTVAPVTCSTMPMPTTQPLVTS 217

  Fly   264 PEKEIDSTMNSATTSATIIK--------ITSSSGSAGGSSNVLNASSSAGISAGSSSGS--GVSS 318
            ...|:.:|: :.||:|.|:.        :|:::|.....:...|::.:|..:|.|::.:  ||::
 Worm   218 TAPEVTTTV-AQTTTAPIVTTANTTTQGVTTTAGVTTTVTRAQNSTLAATTTAPSTNTTTQGVTT 281

  Fly   319 SAKQRKSNASSKSSSSSSSSSSSSTGGAPNPSSSSVHSG---SASNMTGGGSVLPGSSNIGNISN 380
            :..:..:..::::|:.::::::|:|...|..::|:...|   :.:..|...||:|          
 Worm   282 TVGKTTTVTTAQNSTWAATTTASNTTTQPVVTTSTSTQGISTTTAQATPSSSVIP---------- 336

  Fly   381 SLNNNLPGGSSSTSSAGNVPGGSG--GIISASSGGATQSTSSQSSTAPGTTKSSASSSSSSSNSY 443
                       :|:.....|..:|  ..:|.|.|      :|.:|..|.||::|:|:.|:.::::
 Worm   337 -----------TTTQTTQRPTSTGIPSTVSTSQG------TSSTSPIPSTTQTSSSAPSTYTSNF 384

  Fly   444 KEKHSKSLSKSTSSKDKDGKDSSTNSANNN------FTNSSASSTSSNSSSTREKSSSKLSKNKD 502
            ....:.:|..||.:....|..:|:.|::.|      .|..:.|||..:||||...::...|..|.
 Worm   385 TPSPTTTLLTSTIAPSTQGVPTSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPSTPKV 449

  Fly   503 S----NQVPSATSSLSTTSSINTQPSSS--TSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHS- 560
            |    :|.|:.||:....||.::..||:  |||.|..:.|..|..|:      ...|||:|..: 
 Worm   450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSN------QPTPSTSNPTTP 508

  Fly   561 NHAHTLSTNGTGAGSAAGKLQSVSNLSNSSSGFGSDLRSVSTSSSSTVNDSTGGFGSNSNSEREN 625
            ....|.|.:.|||.|.|......|:...|.|      .|.|::.:||| ..|..|          
 Worm   509 KSTVTASPSTTGATSTASPSTITSSAPTSQS------HSPSSTMTSTV-PVTSTF---------- 556

  Fly   626 LSGAGSSASNMPGTIAPGTGGVSSSAATNLSTNKGGS---------------------------- 662
                .|:.:.:|.|:|||.....|:.|.......|.|                            
 Worm   557 ----ASTTTTVPITVAPGQCYCQSNVAVAFELTSGTSDLDLDIQNFIANYLFFYSGAPYILGDLT 617

  Fly   663 SSSTANSLT---------------STSTSSGSSSNSSSKKRKADSAKSTSSISTSGSA-LEDNNS 711
            .:.||.||.               :..|.||.|           :|..|.:|...|:| :.|..:
 Worm   618 DNRTAISLVPFPNDDTLSDLMTYGAEQTPSGIS-----------AALDTFNILARGNAVISDAFN 671

  Fly   712 LISRYDIKDVQVALTPLTDFEKEIE---------------------KSSKRQRTELSPPTHQTSA 755
            :|.....|..|..:..:.:.::.::                     |||.:.....|.|::..:.
 Worm   672 IIPNITRKGYQGFVILVANSDESVQASVDSATNLKAQGFNVITVAFKSSGKFDVLASQPSYNYTI 736

  Fly   756 ------------------TAEVNAPLASST-------SASIAVTASATAASAP------PATGTT 789
                              |...|...||||       |:::.||...:::.||      |.||||
 Worm   737 VQDADKRYVATLIGNVLNTTYCNNLAASSTTMTSGVYSSTVTVTTQGSSSQAPSSTVTVPTTGTT 801

  Fly   790 TLGSSISGNAGSTSSGNSSGVSATGGAQSAVGSGGYPKTESSKSSGTASAGSGSGS-----SSNT 849
            :..:|.:|:..||....|:....|.|:.||      |::.::.||.|.|..:.:||     ||..
 Worm   802 SGAASTTGSITSTQQATSTSSVITTGSTSA------PQSSTAVSSTTTSPSTTTGSTPAPQSSTV 860

  Fly   850 SSTKHGS----------NIKDISSSSNQQASTASSS-SAPSLYVSVPLSTANVP------GINLP 897
            :||...|          .:.:...:|..|..|:||: |..|..||...|:..:|      ....|
 Worm   861 ASTTTVSPYTTTECICTTVSNTFGTSTTQGLTSSSAQSTASTGVSTVASSTTIPQGSSSSSPQSP 925

  Fly   898 T-------SSTSSSTTSESHSASSRSSGAQSQHQQQLSNALVGPPMGGSAGAFHGGTTSAGSSSV 955
            |       ||||::|.:.|.|.|..||.||.                        .:|.||||:|
 Worm   926 TSAQPAQSSSTSAATVTVSSSQSPTSSPAQQ------------------------SSTPAGSSTV 966

  Fly   956 -IQQQSGKSSPALGTLVSGNSGGSIISASGFPLPSGNLTAT-------TTESGNLKISYEKQTTR 1012
             :||.|...||...|.:  .|..::.|.......||..|.|       |...|.:.:.||.....
 Worm   967 TVQQSSSFQSPQSTTQI--GSSTTVPSTQAPSSTSGGPTTTQICPNQQTVFKGQVGVIYEMLPAS 1029

  Fly  1013 VQQLQEQEAPPARRSRSRSGESGSSHHHAHAHHHHH----------HPTHHNSHHQQNPQQQQQL 1067
            .||       .|..:...:....|:.:.....:..|          :||....:.|.....:...
 Worm  1030 TQQ-------NAINAFVENVLLNSNFYGLALDNLTHDNRTLVTAIPYPTTDKYNVQGYGSARSVD 1087

  Fly  1068 HQQQQQNASSHMHACTNSSSSTSTS----TTSSSLSGGTAPATSSSNSK------GPSRSGKKR- 1121
            ..:.|..|.:.|....:.|||.|.:    |||....|..:......||.      .|..:.:.| 
 Worm  1088 EFRNQVIAFNGMIQPISQSSSISDALLYVTTSLPAGGVKSSLIIVGNSAAMIDNIAPILTNQLRS 1152

  Fly  1122 -----------GAA--MNKSESTSVATTATPATVAATPAEKQSRHSSPHYSATPTP----PPTST 1169
                       ||.  ...|..|..:.|.....||.....|.:..:...|...|.|    |.|||
 Worm  1153 DFDIYTVGVGSGAVDLSPLSSGTGFSFTGDTQQVADQIGLKMASSNPSVYCPPPVPSTAAPSTST 1217

  Fly  1170 LPPVVSSPVVML----------------------------QSLSSSSIDSPPATAAAGATSNS-- 1204
            ..|..:.||...                            .:::..:|.:..:.:.|...||:  
 Worm  1218 AVPTTTVPVTTTIATTTRVTTVRPTVGPCQCTGRWVYNGDLAIAFENIKTNGSQSVANFLSNTLL 1282

  Fly  1205 RNTRNNSSNGNHNGEQTSSSS-----SSSSSSSSGGGGTSGAANVVNLLD--SPVNMSASGNYRS 1262
            :|..:.....:.||.|.|..:     .|::..:...|......::.|.:|  ||:.::......|
 Worm  1283 KNPDSYGLTNDVNGNQPSQLTLIPYPDSNTYPTYPYGWIRSVNDIGNYIDAISPLPLATPDPQIS 1347

  Fly  1263 SS-------------------NSTGNALPAASSNASQAKPLNKKMLRAQQT---QLYQQQQQQQQ 1305
            .:                   .|.|..:.||..:|::.|.....::...||   .::|......|
 Worm  1348 DALTFISAQPTTLNSKVVLLVGSNGTDVNAAMDSANKLKNAGYLVITVAQTAAASVFQPLASGSQ 1412

  Fly  1306 YAPPARSISPTNLSSASASNSASLTHLQQQQQSHQQHEDLEILQFTNTNTTASSNTP-------- 1362
            :   |..|...| ..|.|:..||:                 :|.::.|.....|:||        
 Worm  1413 F---ALHIGDGN-DDAVAAQIASM-----------------LLDYSFTCFDDGSSTPSPTTRCPG 1456

  Fly  1363 ---TSKPNNRTLDLSTASASSSSPSAVPATTSPLVVLSNQLPLNSVAASSSTGGLKFTYESQTQM 1424
               |::|......::...:|||..|..|..:|.:..:::...:.|.|.|||              
 Worm  1457 TQGTTQPGTIGTTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSS-------------- 1507

  Fly  1425 DVPMMPVSAIKDSPPSSPGSEIGSAMHSATTAPGSLTGA---STAATAQPGNVRKRGRKAKDATI 1486
              |...||:  .|.|||.|:   ::..|:||...|..||   |.:::..| |....|....:.:.
 Worm  1508 --PQPTVSS--TSVPSSTGA---TSSGSSTTVGSSTVGATQTSVSSSTVP-NTGSTGSTVTNPST 1564

  Fly  1487 AAAAAAAAAAAALSNSQQDLKDVRILQNGASNTPGNPAGSTPTPPATPASSNAVSSASSIITHTA 1551
            :::.:.:::..::.:|        ...|..|:|.|....:|....:|..:||..|:..:......
 Worm  1565 SSSTSGSSSTQSIPSS--------TAANTGSSTSGPTVATTQGSSSTQTNSNTGSTTVATTVTQG 1621

  Fly  1552 AHMLGNQ----IN-PNSSVAQKL-SEQLHMEVQDHSIYTPDSMNSQYAGVPFPGKQRNSTAVPSN 1610
            :...||.    :| .:||||..: |...::|.....|.|..|        |:.||  .:|....|
 Worm  1622 SSTGGNSGSTTVNFQSSSVASTVASSTANIESSTTPIPTCAS--------PYSGK--IATVFELN 1676

  Fly  1611 ATPAQNPLQSMFSGGGMNGNMPIPQSLEQLLERQWEQGSQFLMEQAQHFDIASLLNCLHQLQSEN 1675
            |..|.|.:..:.:....:.|.....|.| .:...:.|...:..:..|:....||.|         
 Worm  1677 ANSATNIVNFVSNNLYNSANYDFTNSTE-AINVPYGQTDHYATQILQYNGTKSLSN--------- 1731

  Fly  1676 LRLEEHVTSLIARRDHLLAVNARLQIPLSTIASN 1709
              |:::|:.|:.  ..:|.::|.:...|..:.:|
 Worm  1732 --LQDNVSDLLT--SAILLIDATISDGLQWLQTN 1761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 4/10 (40%)
ePHD_AF10_like 118..233 CDD:277142 22/122 (18%)
T19D12.1NP_001293517.1 SEA 64..>137 CDD:279699 16/76 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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