DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alh and mllt10

DIOPT Version :9

Sequence 1:NP_001262332.1 Gene:Alh / 40850 FlyBaseID:FBgn0261238 Length:1717 Species:Drosophila melanogaster
Sequence 2:XP_012821091.1 Gene:mllt10 / 100036598 XenbaseID:XB-GENE-6408100 Length:1025 Species:Xenopus tropicalis


Alignment Length:1187 Identity:341/1187 - (28%)
Similarity:500/1187 - (42%) Gaps:299/1187 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 MKEMVGGCCVCSDERGWPENPLVYCDGQNCTVAVHQACYGIVTVPTGPWYCRKCESQERTSRVRC 118
            ||||:||||||||||||.|||||||||..|.|||||||||||.||||||:|||||||||.:||||
 Frog    19 MKEMIGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRC 83

  Fly   119 ELCPSRDGALKKTDNSGWAHVVCALYIPEVRFGNVTTMEPIILSLIPQERYSKTCYICQEIGKPN 183
            ||||.:|||||:|||.||||||||||||||:|.||:|||||:|..:|.|||:||||||.|.|:.:
 Frog    84 ELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPIVLQSVPHERYNKTCYICDEQGRES 148

  Fly   184 RANVGACMQCNKSNCKQQFHVTCAQSLGLLCEEAGNYLDNVKYCGYCQHHYSKLKKGGNVKTIPP 248
            :|..||||.|||..|:|.|||||||..||||||.||..|||:|||||::||||||.....|    
 Frog   149 KAATGACMTCNKHGCRQAFHVTCAQLAGLLCEEEGNGADNVQYCGYCKYHYSKLKHKEKEK---- 209

  Fly   249 YKPIQHDTSSDSCSSPEKEIDSTMNSATTSATIIKITSSSGSAGGSSNVLNASSSAGISAGSSSG 313
                 |...|.....|...:..:: :.||..|   .|.||                     |::.
 Frog   210 -----HRQKSRKQMEPLPALVPSL-TVTTEKT---YTCSS---------------------SNNN 244

  Fly   314 SGVSSSAKQ------RKSNASSKSSSSSSSSSSSSTGGAPNPSSSSVHSGSASNMTGGGSVLPGS 372
            :.|.||.|:      |.:||:.:..|:..:|...:....   ||......:||::|         
 Frog   245 NSVPSSVKRIEDTSARFTNANFQEVSTHPTSVKEALEAR---SSEIKGKKAASHIT--------- 297

  Fly   373 SNIGNISNSLNNNLPGGSSSTSSAGNVPGGSGGIISASSGGATQSTSSQSSTAPGTTKSSASSSS 437
                         |..|..|:|...            .:|.||.::..|.:...||..|..|||.
 Frog   298 -------------LQRGRKSSSGRN------------CAGSATATSPFQQAHFSGTPSSVKSSSG 337

  Fly   438 SSSNSYKE--------------KHSKSLSKSTSSKDKDGKDSS----------------TN---- 468
            ||..|.:|              .||:.|   ||:||....|:.                ||    
 Frog   338 SSVQSPQEFLSFTEFEVRTESYHHSQQL---TSTKDAPKGDTGLQEGTINSFSSLIGLPTNPPLS 399

  Fly   469 -------SANNNFTNSSAS--------STSSNSSSTREKSSSKLSKNKDSNQVPSATSSLSTTSS 518
                   |...::.|||.:        |:..:..:.:||......:||.....|....:..|.|.
 Frog   400 FQTKNYESVPGDYVNSSLTVAGYKRLQSSVLDEDTVKEKKRKGNKQNKHGPGRPKGNKNQETLSH 464

  Fly   519 INTQPSSSTSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSNHAHTLSTNGTGAGSAAGKLQSV 583
            ::...:|.||:..:.:|       |.|:|.:..:|           ||..||           |:
 Frog   465 LSASSASPTSSVASAAG-------SIASSVIQRSP-----------TLLRNG-----------SL 500

  Fly   584 SNLSNSSSGFGSDLRSVSTSSSSTVNDSTGGFGSNSNSERENLSGAGS--SASNMPGTIAPGTGG 646
            .:||..||..||       :|....||....|.|       .|||:.:  |:|::|...|.....
 Frog   501 QSLSVGSSPGGS-------ASLCNCNDVPTSFPS-------ALSGSSTPVSSSHIPQPAAAHLQQ 551

  Fly   647 VSSSAATNLSTNKGGSSSSTANSLTSTSTSSGSSSNSSSKKRKADSAKSTSSISTSGSALEDNNS 711
            ..||:.::|:|....:.::..:||..:|.:. |||::..::....||..|..: .|.:|..|.::
 Frog   552 EVSSSPSSLATVPANTVATQVSSLPGSSLAM-SSSHTYGRRLNPTSAAGTLPV-PSENAQPDQDA 614

  Fly   712 LISRYDIKDVQVALTPLTDFEKEIEKSSKRQRTELSPPTHQTSATAEVNAPLASSTSASIAVTAS 776
            :                 |..:.:.......|..:||..:.....::..:||.|..::....:.:
 Frog   615 V-----------------DHNRNLPAKGASPRGSISPRLNIYGVGSDKISPLNSLATSRFEPSGN 662

  Fly   777 ATAASAPPATGTTTLGSSI-----SGNAGSTSSGNSSGV----------------------SATG 814
            ::..|.|||  .|::...:     .|.......|.||.:                      :.|.
 Frog   663 SSLESVPPA--ATSIEQLLERQWSEGQQFLQEQGTSSDILGMLKSLHQLQVENRRLEEQIKNLTA 725

  Fly   815 --------GAQSAVGSGGYPKTESSKSSGTASAGSGSGSSSNTSSTKHGSNIKDISSSSNQQAST 871
                    .||.:|   .:|         |.|      |:.|||...|...::::|:|.:...|.
 Frog   726 KKERLQLLNAQLSV---PFP---------TIS------SNPNTSPQVHTYPLQNVSNSDSLNISK 772

  Fly   872 ASSSSAPSLYVSVPLSTANVPGINLPTSSTSSSTTSES------------HSASSRSSGAQSQHQ 924
            :.......|..::|:....:......|||:||.:|...            |..:..:.||.:...
 Frog   773 SPHLGNFQLDNALPVPNQELTSSGQSTSSSSSLSTPPPDGQSPAQQVQGVHRINGVAMGALTSGI 837

  Fly   925 QQLSNALVGPPMGGSAGAFHGG------TTSAGSSSVIQQQSGKSSPALGTLVSGNSGGSIISAS 983
            |.::.||   |...|.||..|.      :.:.|:.:.:.|     :||.....:..:.|||:...
 Frog   838 QSVTQAL---PNVASVGAIIGALPANQLSINFGALNGVMQ-----NPANLPQTAALTHGSILPNV 894

  Fly   984 GFPLPSGNLTATTTESGNLKISYEKQTTRVQQLQEQEAPPARRSRSRSGESGSSHHHAHAH---- 1044
            ..|:.|    :....:..|.:..::|...:...|:|:......|:..:.|    .||...:    
 Frog   895 THPITS----SLANSASGLGLLTDQQRQLLLHQQQQQFQHILNSQQLTPE----QHHTFLYQLMQ 951

  Fly  1045 -HHHHHPTHHNSHHQQNPQQQQQLHQQQQQNASSHMHACTNSSSSTSTSTTSSSLSGGTAPATSS 1108
             ||.....||     |...||.|:....|...:|.:.....:...::|:....:|.|.||     
 Frog   952 QHHQQQQQHH-----QPELQQLQIPGAAQLPLNSLLAGAQAAPLHSTTTNPFLALHGDTA----- 1006

  Fly  1109 SNSKGPSRSGKKRGAAM 1125
              ::..||.|.|.|..:
 Frog  1007 --AQKVSRLGDKSGPVL 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlhNP_001262332.1 PHD_AF10_AF17 60..107 CDD:277049 40/46 (87%)
ePHD_AF10_like 118..233 CDD:277142 81/114 (71%)
mllt10XP_012821091.1 PHD_AF10_AF17 25..72 CDD:277049 40/46 (87%)
ePHD_AF10 79..207 CDD:277178 90/127 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3065
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 369 1.000 Inparanoid score I2092
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004366
OrthoInspector 1 1.000 - - otm47725
Panther 1 1.100 - - LDO PTHR13793
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3088
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.150

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