DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and LRG1

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_010041.2 Gene:LRG1 / 851358 SGDID:S000002399 Length:1017 Species:Saccharomyces cerevisiae


Alignment Length:478 Identity:94/478 - (19%)
Similarity:140/478 - (29%) Gaps:181/478 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 CPRCGGYVYAAEQ-----MLARGRSWHKECFKCGTCKKGL-------------DSILCCEAP--- 163
            |.||...|....|     :.|.|:.:|:.||.|..|:|.|             :|||.|:..   
Yeast    28 CARCNKLVIPDSQRTKTTLKALGKYYHESCFTCQDCQKPLKPKYFPYQVDKTSESILLCQYDYFR 92

  Fly   164 DKNIYC-------KGCYAKKFGPKGYGYGQGGGALQ--------SDCYAHDDGAPQIRAAIDVDK 213
            ..|:.|       :|.|...|   ||.|.:...:..        ..|:.:.:   |:.......|
Yeast    93 RHNLLCHVCDTPLRGLYYTAF---GYRYDEEHFSCTICATPCGVKKCFMYGN---QLYCKYHFLK 151

  Fly   214 IQARPGEGCPRCGGVVYAAEQ---KLSKGRE---WHKKCFNC-KDCHKTLDS------------I 259
            ..::      ||.|..:....   :..||.|   ||.:|:.. |..|..|.:            .
Yeast   152 YFSK------RCKGCEFPISDQYIEFPKGEEIHCWHPECYGIHKYWHVNLAAETVGLQYLPKLEY 210

  Fly   260 NASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLTEDQISANRPFYNPDTTSIKARDGEG 324
            |.:.| |:|:          .|..|..             :.|:.|.. |....|.|:..|..|.
Yeast   211 NPNSG-DKDI----------NPTAYEL-------------DKQMQAFN-FILSKTWSVLYRFEEE 250

  Fly   325 CPRCGGAVF---AAEQQL----SKGKVWHKKCYNCADC-HRPLDSVLACDGP----DGDIHC--- 374
            ...|...:|   .:..||    |.|.:..|     .|| .|.||::......    :.|..|   
Yeast   251 AASCISDMFQYLTSNDQLKGIESTGLLVLK-----IDCLFRGLDTLNLSTNKSMPVNSDQECIEN 310

  Fly   375 ----RACYGKLFGPKGF---------------------------------GYGHAPTLVSTSGES 402
                .:.|.|.  ||..                                 |..|...|::..|..
Yeast   311 NAMAASKYSKF--PKNLSTKIMIYLQLLRKLGTENKNETITISSFMSVITGLAHFLKLLTRFGLY 373

  Fly   403 TI-----------------------QFPDGRPLAGPKT----SGGCPRCGFAVFAAEQMIS-KTR 439
            |.                       :..:..|....||    :..|..|.  .:..|:.|. ...
Yeast   374 TALENNKLTHSVNPLLRFLREVEKNELFENNPFQYIKTPVNATDSCAGCN--KYIQEECIQFYEH 436

  Fly   440 IWHKRCFYCSDCRKSLDSTNLND 462
            .||..||.||.|.|:::..:|.|
Yeast   437 RWHIACFTCSSCHKNINPRSLTD 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 21/80 (26%)
LIM_CRP_like 222..275 CDD:188712 16/71 (23%)
LIM_CRP_like 325..378 CDD:188712 14/71 (20%)
LIM_CRP_like 421..474 CDD:188712 14/43 (33%)
LRG1NP_010041.2 LIM1_Lrg1p_like 28..90 CDD:188777 18/61 (30%)
LIM 98..149 CDD:259829 9/56 (16%)
LIM3_Lrg1p_like 419..475 CDD:188779 14/43 (33%)
RhoGAP_fLRG1 728..959 CDD:239862
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24215
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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