DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and WLIM1

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_172491.1 Gene:WLIM1 / 837558 AraportID:AT1G10200 Length:190 Species:Arabidopsis thaliana


Alignment Length:188 Identity:55/188 - (29%)
Similarity:79/188 - (42%) Gaps:26/188 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCKTCHGRKFGPKGYGF 75
            ||..|.|:||..::..|...|:||.||:|..|..:|..:|....|..|||:....:.|...|...
plant     9 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQNFKRTGSLE 73

  Fly    76 GTGAGTLSMDNGSQFLRENGDVPS---VRN---GARLEPRAIARAPEGEGCPRCGGYVYAAEQML 134
            .:..||..:....:.|  .|:.|:   |.|   |.|            |.|..|...||..|::.
plant    74 KSFEGTPKIGKPDRPL--EGERPAGTKVSNMFGGTR------------EKCVGCDKTVYPIEKVS 124

  Fly   135 ARGRSWHKECFKC--GTCKKGLDSILCCEAPDKNIYCKGCYAKKFGPKG-YGYGQGGG 189
            ..|..:||.||||  |.|.....:.:   |.:..:|||..:.:....|| ....:|||
plant   125 VNGTLYHKSCFKCTHGGCTISPSNYI---AHEGKLYCKHHHIQLIKEKGNLSQLEGGG 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 20/52 (38%)
LIM_CRP_like 120..173 CDD:188712 18/54 (33%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
WLIM1NP_172491.1 LIM1_SF3 6..68 CDD:188824 21/58 (36%)
LIM2_SF3 110..170 CDD:188825 18/62 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1214165at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm966
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X318
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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