DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and nrap

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_021335836.1 Gene:nrap / 724004 ZFINID:ZDB-GENE-060616-224 Length:1862 Species:Danio rerio


Alignment Length:409 Identity:79/409 - (19%)
Similarity:120/409 - (29%) Gaps:142/409 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCKTCHGRKFGPKGYGF 75
            ||.|||..||.||:....|..:||.||.|.:|...|.:.|...|::..||:.     ..||...|
Zfish     5 KCARCGFVVYPAEKVNLIGQNWHKACFHCEVCKMVLTANNYVSHQKRPYCQV-----HNPKNNTF 64

  Fly    76 GTGAGT---LSMDNGSQFLREN-------------------GDVPSVRNGARLEPRAIARAPEGE 118
            .:...|   ::....|:.:.||                   .::...|..::|..:......|  
Zfish    65 TSVYETPVNINAKKQSEAVSENKYKEEGERFMSTFHYDMRSKEIEQARKASQLASQQQGYQTE-- 127

  Fly   119 GCPRCGGYVYAAEQMLARGRSWHKECFKCGTCKKGLDSILCCEAPDKNIYCKGCYAKKFGPKGYG 183
                     :..:|....|....:|..:....:|.:..:                         .
Zfish   128 ---------FVGQQSFYSGSVTSQEIVRVSQTQKTISDV-------------------------E 158

  Fly   184 YGQGGGALQSDCYAHDDGAPQIRAAIDVDKI-QARPGEGCPRCGGVVYAAEQKLSKGR------- 240
            |.:|          |:....|..:..|..:: .|:.|...  ...|.|..|.:.|||:       
Zfish   159 YKRG----------HETRMLQFTSVADSPEVLHAKTGVSL--ASDVKYTEEYEQSKGKGSFPAMI 211

  Fly   241 ----EWHKKC------FNCKDCHKTLDS--INASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFL 293
                |..||.      ...|..|:...|  ...:|.|  ||......||....|.|         
Zfish   212 TPGYEMAKKANTLASNLEYKKGHEERVSKYTTVTDTP--DVLLAKTQGKIVSDHVY--------- 265

  Fly   294 QTDGLTEDQISANRP-FYNPD-TTSIKARD----------------GEGCPRCGGAVFAA----- 335
             |:|..:.:...:.| .:.|. ..:.||.|                |:.....|.|.||.     
Zfish   266 -TEGYEQQRGKGSFPAHFTPGYQVAKKAGDMASKVKYQQKYEQEIKGKASTEAGAAEFALAKENA 329

  Fly   336 ------------EQQLSKG 342
                        |||..||
Zfish   330 EHFSQHAYTEEYEQQRGKG 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 21/52 (40%)
LIM_CRP_like 120..173 CDD:188712 4/52 (8%)
LIM_CRP_like 222..275 CDD:188712 16/71 (23%)
LIM_CRP_like 325..378 CDD:188712 9/35 (26%)
LIM_CRP_like 421..474 CDD:188712
nrapXP_021335836.1 LIM_N_RAP 6..58 CDD:188830 20/56 (36%)
NEBU 170..200 CDD:128523 6/31 (19%)
Nebulin 355..379 CDD:307158
Nebulin 535..560 CDD:307158
NEBU 565..595 CDD:128523
NEBU 672..702 CDD:128523
NEBU 703..733 CDD:128523
NEBU 771..798 CDD:128523
NEBU 1014..1044 CDD:128523
NEBU 1158..1188 CDD:128523
NEBU 1257..1287 CDD:128523
NEBU 1292..1321 CDD:128523
NEBU 1401..1430 CDD:128523
NEBU 1644..1674 CDD:128523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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