DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and mical2b

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_005174396.1 Gene:mical2b / 569564 ZFINID:ZDB-GENE-061207-15 Length:1679 Species:Danio rerio


Alignment Length:359 Identity:72/359 - (20%)
Similarity:112/359 - (31%) Gaps:101/359 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HKNCFKCGMCNKSLDSTNCTEHERELYCKTCHGRKFGPKGYGFGTGAGTLSMDNGSQFLRENGDV 97
            ||.|.:....:...|..  ||..|.........|..|......|..|.||::      |.|....
Zfish   920 HKQCSEASETHLKADKH--TEIRRVERLDPSKQRTVGKVSSAIGVKAATLAI------LYETDHR 976

  Fly    98 PSVRNGARLEPRAIARAPE----------------GEGCPRCGGYVYAAEQMLARGRSWHKECFK 146
            |:  |...|......|..|                .:.|..|...||..|::.|.|..:|:|||:
Zfish   977 PN--NPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFR 1039

  Fly   147 CGTC----KKGLDSILCCEAPDKNIYCKGCYAKKFGPKGYGYG--QGGGALQSDC----YAHDDG 201
            |..|    :.|..:.   ::.....|||..::::.....:..|  |.||...|..    :...||
Zfish  1040 CHICGCSLRLGAHTF---DSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDG 1101

  Fly   202 A--------------------PQIRAAIDVDKI-----QARPGEGCPRC-GGVVYAAEQKLSKGR 240
            .                    |..:..|.|.::     :|.|.:..|.| ...:...::..:||.
Zfish  1102 TRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGE 1166

  Fly   241 EWHKKCFNCKDCHKTLDSINASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLTE----- 300
            ..:|.....|....||..:               ..||       |..|....:|:.|.|     
Zfish  1167 ITNKNILWKKKIRSTLPLV---------------LMKK-------FHRGKPEDKTEVLAEEDGNS 1209

  Fly   301 ------DQISANRPFYNPDTTS--IKARDGEGCP 326
                  :.:|:.:| .||.|.|  :..:|....|
Zfish  1210 DFEEIHESLSSKKP-SNPSTDSNCLPTKDNSSTP 1242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 7/30 (23%)
LIM_CRP_like 120..173 CDD:188712 17/56 (30%)
LIM_CRP_like 222..275 CDD:188712 8/53 (15%)
LIM_CRP_like 325..378 CDD:188712 1/2 (50%)
LIM_CRP_like 421..474 CDD:188712
mical2bXP_005174396.1 FAD_binding_3 86..>274 CDD:332373
CH 522..623 CDD:306753
LIM_Mical 1013..1067 CDD:188823 17/56 (30%)
Atrophin-1 1080..>1344 CDD:331285 34/186 (18%)
YesN <1308..1371 CDD:330857
DUF3585 1530..1665 CDD:314926
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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