DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and crip3

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_021323078.1 Gene:crip3 / 556515 ZFINID:ZDB-GENE-130530-620 Length:213 Species:Danio rerio


Alignment Length:215 Identity:74/215 - (34%)
Similarity:100/215 - (46%) Gaps:43/215 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYC-KTCHGRKFGPKGYGF 75
            ||||.|:|:.||:..:.|..:|:.|.||..|:|.|......||:...|| |.|:|..|||||...
Zfish     5 CPRCDKTVFFAEKVSSLGKNWHRFCLKCERCSKILSPGGHAEHDGLPYCHKPCYGTLFGPKGVNI 69

  Fly    76 GTGAGTLSMDNGSQF-LRENGDVPSVRNGARLEP--------------RAIARAPEGEG--CPRC 123
            | |||:...|...|. :.:..:.||  .|:...|              .|.||...||.  ||.|
Zfish    70 G-GAGSYIYDTPPQTPVNKTCNSPS--EGSPTTPWTTSQINFNQPKAATAPARMFAGETYLCPGC 131

  Fly   124 GGYVYAAEQMLARGRSWHKECFKCGTCKKGL--------DSILCCEAPDKNIYCKGCYAKKFGPK 180
            |..||.||::::.||:||:.|.:|..|||.|        :....|..|        ||...||||
Zfish   132 GKAVYFAEKVMSLGRNWHRPCLRCVRCKKTLTPGGHAEHEGSPYCHVP--------CYGYLFGPK 188

  Fly   181 GYGYGQGGGALQSDCYAHDD 200
            |...|:.|      ||.:::
Zfish   189 GVNIGRVG------CYIYEN 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 21/52 (40%)
LIM_CRP_like 120..173 CDD:188712 20/60 (33%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
crip3XP_021323078.1 LIM1_TLP 5..58 CDD:188860 21/52 (40%)
LIM2_TLP 128..181 CDD:188861 20/60 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1214165at2759
OrthoFinder 1 1.000 - - FOG0000284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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