DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and crip3

DIOPT Version :10

Sequence 1:NP_477122.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_021323078.1 Gene:crip3 / 556515 ZFINID:ZDB-GENE-130530-620 Length:213 Species:Danio rerio


Alignment Length:215 Identity:74/215 - (34%)
Similarity:100/215 - (46%) Gaps:43/215 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYC-KTCHGRKFGPKGYGF 75
            ||||.|:|:.||:..:.|..:|:.|.||..|:|.|......||:...|| |.|:|..|||||...
Zfish     5 CPRCDKTVFFAEKVSSLGKNWHRFCLKCERCSKILSPGGHAEHDGLPYCHKPCYGTLFGPKGVNI 69

  Fly    76 GTGAGTLSMDNGSQF-LRENGDVPSVRNGARLEP--------------RAIARAPEGEG--CPRC 123
            | |||:...|...|. :.:..:.||  .|:...|              .|.||...||.  ||.|
Zfish    70 G-GAGSYIYDTPPQTPVNKTCNSPS--EGSPTTPWTTSQINFNQPKAATAPARMFAGETYLCPGC 131

  Fly   124 GGYVYAAEQMLARGRSWHKECFKCGTCKKGL--------DSILCCEAPDKNIYCKGCYAKKFGPK 180
            |..||.||::::.||:||:.|.:|..|||.|        :....|..|        ||...||||
Zfish   132 GKAVYFAEKVMSLGRNWHRPCLRCVRCKKTLTPGGHAEHEGSPYCHVP--------CYGYLFGPK 188

  Fly   181 GYGYGQGGGALQSDCYAHDD 200
            |...|:.|      ||.:::
Zfish   189 GVNIGRVG------CYIYEN 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_477122.1 LIM1_MLP84B_like 11..64 CDD:188788 21/52 (40%)
LIM_CRP_like 120..173 CDD:188712 20/60 (33%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
crip3XP_021323078.1 LIM1_TLP 5..58 CDD:188860 21/52 (40%)
LIM2_TLP 128..181 CDD:188861 20/60 (33%)
Blue background indicates that the domain is not in the aligned region.

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