DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and mical3a

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_021323435.1 Gene:mical3a / 402881 ZFINID:ZDB-GENE-050126-2 Length:2522 Species:Danio rerio


Alignment Length:413 Identity:88/413 - (21%)
Similarity:129/413 - (31%) Gaps:146/413 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 EQMLARGRSWHKECFKCGT-------CKKGLDSILCCEAPDKNIY------CKGCYAKKFGP--- 179
            |||..|    :||..||.|       ...|.:.:..|  |.|.|.      ....::..|.|   
Zfish   807 EQMSFR----YKEKLKCQTLPITQEQASSGTEVLRSC--PKKTILLSSSSPSSSSFSSSFPPHAQ 865

  Fly   180 ----KGYGYGQGGGALQ--SDCYAHDDGAPQI--RAAIDVDKIQARPGEGCPRCGGVVYAAEQKL 236
                |..|.|.|....|  |.|| .:|..|.:  ...|.:..||.|              ||..:
Zfish   866 SVIHKCNGVGDGENRFQDLSVCY-WEDNLPNVDKPEPIHIRSIQER--------------AETLV 915

  Fly   237 S--KGREWHKKCFNCKDCHKTLDSINASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLT 299
            :  ||:...|            |.......|.|      .:.::|            || |.||:
Zfish   916 ARFKGKADRK------------DKPQVMKKPSR------FFIEQW------------FL-THGLS 949

  Fly   300 EDQ-ISANRPFYN-------PD------TTSIKAR---------DGEGCPRC--GGAVFAAEQQL 339
            .|: :.::.|.::       ||      ..||:.|         |....|:.  ..::...||  
Zfish   950 PDEPVFSSDPQHHQQKGVLCPDDHVPLHIPSIQERAERLASHFKDKPAKPKSKKKSSLLLTEQ-- 1012

  Fly   340 SKGKVWHKKCYNCADCHRPLDSVLACDGPDG-DIHCRACYGKLFGPKGFGYGHAPTLVSTSGEST 403
                 |.:.        |.:.|......|.. ..||...|          .|...:|........
Zfish  1013 -----WSRA--------RDVSSASPLHSPSSFRQHCVKMY----------TGGVSSLAEQIANQL 1054

  Fly   404 IQFPDGRPLAG-----------PKTSGGCPRCGFA---VFAAEQMISKTRIWHKRCFYCSDCRKS 454
            ....|.||:..           |:..||...|.|.   |:..|::.::.:.:|:.||.|..|..:
Zfish  1055 QAKDDPRPMLEKRDLGSFRKEFPQNIGGSDVCFFCRKRVYVMERLSAEGKFFHRSCFKCDYCGTT 1119

  Fly   455 LD-STNLNDGPDGDIYCRA--CY 474
            |. |:...|..||..||:.  ||
Zfish  1120 LRLSSYAFDVEDGKFYCKPHYCY 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 14/54 (26%)
LIM_CRP_like 222..275 CDD:188712 8/54 (15%)
LIM_CRP_like 325..378 CDD:188712 9/55 (16%)
LIM_CRP_like 421..474 CDD:188712 16/58 (28%)
mical3aXP_021323435.1 FAD_binding_3 91..>239 CDD:332373
CH 536..636 CDD:306753
LIM_Mical 1086..1140 CDD:188823 16/53 (30%)
Herpes_BLLF1 <1488..1803 CDD:330317
DUF4045 <1840..>1896 CDD:330572
SMC_N <2220..>2506 CDD:330553
DUF3585 2318..2508 CDD:314926
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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