DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlp84B and Mical3

DIOPT Version :10

Sequence 1:NP_477122.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_036021853.1 Gene:Mical3 / 194401 MGIID:2442733 Length:2252 Species:Mus musculus


Alignment Length:349 Identity:65/349 - (18%)
Similarity:105/349 - (30%) Gaps:125/349 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 PEGEG----CPRCGGYVYAAEQMLARGRSWHKECFKCGTCKKGLD-SILCCEAPDKNIYCKGCYA 174
            |:..|    |..|...||..|::.|.|:.:|:.||||..|...|. |....:..|...|||..|.
Mouse   907 PQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYC 971

  Fly   175 KKFGPKGYGYGQ---------GG----GALQSDCYAHDDGAPQI--------------------- 205
            .:..    ||.|         .|    ||||....|..:|...:                     
Mouse   972 YRLS----GYAQRKRPAVAPLSGKEVKGALQDGPTADANGLASVAASSAERSPGTSMNGLEEPSI 1032

  Fly   206 -----------------RAAIDVDKIQARPGEGCPRCGGVVYAAEQKLS----KGREWHKKCFNC 249
                             |:...|::::..|.|         ..||..||    ||.|   :....
Mouse  1033 AKRLRGTPERIELENYRRSVRQVEELEEVPEE---------TQAEHNLSSVLDKGTE---EDVAS 1085

  Fly   250 KDCHKTLDSINASDGPDRDVYCRTCYGKKWGP----HGYGFACGSGFLQTDGLTEDQISANRPF- 309
            ......::.....|..|..:......|..|..    |..          ..|.:|:::.|::.| 
Mouse  1086 SSSESEMEEEEEEDDEDDHLPTSDLGGVPWKEAVRIHAL----------LKGRSEEELEASKNFE 1140

  Fly   310 ----------------YNPDTTSIKARDGEGCPRCGGAVFAAEQQLSKGKVW------HKKCYNC 352
                            |..:.....:.:||.||        .:::|.:|: |      .::...|
Mouse  1141 PEEEEEEEEYEEEDEEYEEEEEEESSEEGEYCP--------WDRELLQGQ-WLQHLSKEEEMGTC 1196

  Fly   353 ADCHRPLDSVLACDGP---DGDIH 373
            ...::.|..::....|   ..|:|
Mouse  1197 EAGNKRLQQIITAADPLAIQADVH 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_477122.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 19/53 (36%)
LIM_CRP_like 222..275 CDD:188712 9/56 (16%)
LIM_CRP_like 325..378 CDD:188712 10/58 (17%)
LIM_CRP_like 421..474 CDD:188712
Mical3XP_036021853.1 UbiH 85..>226 CDD:440419
CH_MICAL3 515..625 CDD:409100
LIM_Mical 916..970 CDD:188823 19/53 (36%)
PHA03307 1280..>1709 CDD:223039
bMERB_dom 2068..2238 CDD:463467
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.