DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and Mical3

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_036021853.1 Gene:Mical3 / 194401 MGIID:2442733 Length:2252 Species:Mus musculus


Alignment Length:349 Identity:65/349 - (18%)
Similarity:105/349 - (30%) Gaps:125/349 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 PEGEG----CPRCGGYVYAAEQMLARGRSWHKECFKCGTCKKGLD-SILCCEAPDKNIYCKGCYA 174
            |:..|    |..|...||..|::.|.|:.:|:.||||..|...|. |....:..|...|||..|.
Mouse   907 PQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYC 971

  Fly   175 KKFGPKGYGYGQ---------GG----GALQSDCYAHDDGAPQI--------------------- 205
            .:..    ||.|         .|    ||||....|..:|...:                     
Mouse   972 YRLS----GYAQRKRPAVAPLSGKEVKGALQDGPTADANGLASVAASSAERSPGTSMNGLEEPSI 1032

  Fly   206 -----------------RAAIDVDKIQARPGEGCPRCGGVVYAAEQKLS----KGREWHKKCFNC 249
                             |:...|::::..|.|         ..||..||    ||.|   :....
Mouse  1033 AKRLRGTPERIELENYRRSVRQVEELEEVPEE---------TQAEHNLSSVLDKGTE---EDVAS 1085

  Fly   250 KDCHKTLDSINASDGPDRDVYCRTCYGKKWGP----HGYGFACGSGFLQTDGLTEDQISANRPF- 309
            ......::.....|..|..:......|..|..    |..          ..|.:|:::.|::.| 
Mouse  1086 SSSESEMEEEEEEDDEDDHLPTSDLGGVPWKEAVRIHAL----------LKGRSEEELEASKNFE 1140

  Fly   310 ----------------YNPDTTSIKARDGEGCPRCGGAVFAAEQQLSKGKVW------HKKCYNC 352
                            |..:.....:.:||.||        .:::|.:|: |      .::...|
Mouse  1141 PEEEEEEEEYEEEDEEYEEEEEEESSEEGEYCP--------WDRELLQGQ-WLQHLSKEEEMGTC 1196

  Fly   353 ADCHRPLDSVLACDGP---DGDIH 373
            ...::.|..::....|   ..|:|
Mouse  1197 EAGNKRLQQIITAADPLAIQADVH 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 19/53 (36%)
LIM_CRP_like 222..275 CDD:188712 9/56 (16%)
LIM_CRP_like 325..378 CDD:188712 10/58 (17%)
LIM_CRP_like 421..474 CDD:188712
Mical3XP_036021853.1 FAD_binding_3 87..>274 CDD:396193
CH_MICAL3 515..625 CDD:409100
LIM_Mical 916..970 CDD:188823 19/53 (36%)
PHA03307 1280..>1709 CDD:223039
DUF3585 2065..2233 CDD:403377
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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