DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and tag-273

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001294000.1 Gene:tag-273 / 178388 WormBaseID:WBGene00013289 Length:891 Species:Caenorhabditis elegans


Alignment Length:722 Identity:134/722 - (18%)
Similarity:188/722 - (26%) Gaps:310/722 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFQPI---EAPKCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCKTCH 64
            :||.:   |...|..|.|.||..|:.||...::|..||||..|.|.|..||...||.:|.||...
 Worm   188 AFQEVKQEEKKNCCICDKVVYPVEKVLANKNLYHIQCFKCCKCAKKLTPTNFNSHEGKLLCKVHM 252

  Fly    65 GRKFGPK---------------------------------------GYG---------------- 74
            ...|.|:                                       |.|                
 Worm   253 LEVFHPEIAHTMDPQNTEEDEHAASDEEEFAVSSKPKQLQGVVKSGGGGVHDELAQLKSLREKKG 317

  Fly    75 ----------------------------------FGTGAGTLSMDNGSQ-------FLR------ 92
                                              |.:||...:.|:.|:       .:|      
 Worm   318 DFESSCKEVDNVEKKTQIEKDLLAAGKVKANAEKFISGAALENSDDESESADRDPNIIRGSKKAE 382

  Fly    93 ------EN-GDVPSVRNGARLEPRAIARAPEGEGCPRCGGYVYAAEQMLARG--------RSWHK 142
                  || ||:.:......:|......|.|.:......|.|...::...||        |||:|
 Worm   383 KVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVSVKDRFKERGDNDEQVVERSWNK 447

  Fly   143 ECFKCGTCKKGLDSILCCEAPD------KNIYCKGCYAKKFGP-KGYGYGQGGGALQSDCYAHDD 200
            :........:...|.:...|.|      |.:  |.....|||. ||:                .|
 Worm   448 DELSTSAAAEARKSFMAGSAYDAANPVEKTV--KDLDDLKFGQLKGF----------------KD 494

  Fly   201 GAPQIRAAIDVDKIQARPGEGCP--------RCGGVVYAAEQKLSKGREWHKKCFNCKDCHKTLD 257
            ...:....::|.|.|...|||..        ..|..|..:|....:..|..|:            
 Worm   495 KFEKGEEGVEVQKTQVDLGEGVQLGNIKATFEKGNAVDESEMTAEERAELKKR------------ 547

  Fly   258 SINASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLTEDQISANRPFYNPDTTSI----K 318
            .|.|.       :.|           |..|..|...|.:.:.|::  ||:. |||....:    |
 Worm   548 EIEAE-------FQR-----------YKLARKSAKAQEEVVGEEE--ANKG-YNPLDVEVKMAGK 591

  Fly   319 ARDGEGCPRCGGAVFAAEQQLSKG---KVWHKKCYNCADCHRPLDSVL----------------A 364
            ||:........||.....||..|.   ..|.||      ..:|:..|:                |
 Worm   592 AREKFRQIDASGASPVLPQQSKKSTEPSKWDKK------DDKPVAEVINRRNTDEQEPEEEEDDA 650

  Fly   365 CD-----------GPDG-----------DIHCRACYGKLFGPKGFGYGHAPT------------- 394
            .|           |..|           ::....|..|.|..|....|.|..             
 Worm   651 FDVKNLMNKFKNIGDSGNQKTQNTEHRAELEALKCAAKDFKAKFENAGEADADAAVVEAKRQQME 715

  Fly   395 ---------------------LVSTSGE------------------------STIQFPDGR---- 410
                                 |...|..                        ..||..:.:    
 Worm   716 EEFEAMKREREEAQKRLEEERLAEASASQGNEARDEDVAIKAEHASKMAAKWEKIQQKEAKKAEK 780

  Fly   411 -PLAGPKTSGG---------CPRCGFAVFAAEQMISKTRIWHKRCFYCSDCRKSLDSTNLND-GP 464
             .:...||..|         |..|...|:.|||......::|..||.|.||:::|.....:. ..
 Worm   781 GKMPEKKTGNGRFCLPPPDKCSLCTKNVYRAEQFQCFGLLYHVNCFRCIDCKQALRVEKAHRCQQ 845

  Fly   465 DGDIYCR 471
            .||:|||
 Worm   846 SGDLYCR 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 23/52 (44%)
LIM_CRP_like 120..173 CDD:188712 13/66 (20%)
LIM_CRP_like 222..275 CDD:188712 8/60 (13%)
LIM_CRP_like 325..378 CDD:188712 14/93 (15%)
LIM_CRP_like 421..474 CDD:188712 18/52 (35%)
tag-273NP_001294000.1 LIM 200..252 CDD:351770 23/51 (45%)
PTZ00121 <271..762 CDD:173412 83/547 (15%)
LIM_Mical_like 801..855 CDD:188744 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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