DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and Mical1

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_006512633.1 Gene:Mical1 / 171580 MGIID:2385847 Length:1207 Species:Mus musculus


Alignment Length:112 Identity:28/112 - (25%)
Similarity:35/112 - (31%) Gaps:34/112 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 DVPSVRNGARLEPRAIARAPE---------GEGCPRCGGYVYAAEQMLARGRSWHKECFKCGTCK 151
            :.||.......||......||         .|.|..||.::|..|:....|..:|:.||.|.||:
Mouse   809 ETPSTEEPPVSEPSMSPNTPELSEHQEAGAEELCELCGKHLYILERFCVDGHFFHRSCFCCHTCE 873

  Fly   152 KGLDSILCCEAPDKNIYCKGCYAKKFGPKGYGYGQGGGALQSDCYAH 198
            ..|                       .|.|||...|.|...  |..|
Mouse   874 ATL-----------------------WPGGYGQHPGDGHFY--CLQH 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 13/52 (25%)
LIM_CRP_like 222..275 CDD:188712
LIM_CRP_like 325..378 CDD:188712
LIM_CRP_like 421..474 CDD:188712
Mical1XP_006512633.1 FAD_binding_3 244..>281 CDD:366675
CH 670..770 CDD:366016
LIM_Mical_like 842..895 CDD:188744 20/77 (26%)
DUF3585 1077..1205 CDD:371910
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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