DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and lima1b

DIOPT Version :10

Sequence 1:NP_477122.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_021335365.2 Gene:lima1b / 108191643 ZFINID:ZDB-GENE-030131-4116 Length:1126 Species:Danio rerio


Alignment Length:193 Identity:51/193 - (26%)
Similarity:76/193 - (39%) Gaps:50/193 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 KLSKGREWHKKCFNCKD---------CHKTLDSINASDG-PDRDVYC------------------ 271
            |.|||....|:..:.||         |.:...|.:||.. .|..|:|                  
Zfish   525 KASKGTSPLKRTGSIKDRLTRYQLAVCKQASVSRSASQSEADDSVFCADSKEMAPSAGHGRILSK 589

  Fly   272 --RTCYGKKWGPHGYGFACGSGFLQTDGLTEDQISANRPFY---NPDTTSIKARDGEGCPRCGGA 331
              ||...|..|.|....:.|         ||..:|.|:.|:   .|...::..|    |..|...
Zfish   590 VPRTNIAKINGEHVNASSPG---------TETLLSENKEFHKFTKPFQVAVPDR----CVSCQQT 641

  Fly   332 VFAAEQQLSKGKVWHKKCYNCADCHRPLDSVLACDGPDGDIHCRACYGKLFGPKG---FGYGH 391
            |:..|:.::..:::||||:.||.|...| |:.|.....|.|:|:..:.:||..||   .|:||
Zfish   642 VYQLERLVANQQIYHKKCFRCAVCSTKL-SLAAFASLHGSIYCKPHFNQLFKSKGNYDEGFGH 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_477122.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712
LIM_CRP_like 222..275 CDD:188712 16/69 (23%)
LIM_CRP_like 325..378 CDD:188712 17/52 (33%)
LIM_CRP_like 421..474 CDD:188712
lima1bXP_021335365.2 None
Blue background indicates that the domain is not in the aligned region.

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