DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp84B and mical3

DIOPT Version :9

Sequence 1:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_031754432.1 Gene:mical3 / 100486205 XenbaseID:XB-GENE-996271 Length:2242 Species:Xenopus tropicalis


Alignment Length:351 Identity:76/351 - (21%)
Similarity:122/351 - (34%) Gaps:98/351 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCTEHERE---LYCKT--CHGRKFGPK 71
            |..|.:.||..|...|.|..||::||||..|:.:| ..:|..::.|   .|||.  |:.|    .
 Frog   904 CYFCRRRVYVMERLSAEGKFFHRSCFKCDYCSTTL-RLSCYAYDLEDGKFYCKPHYCYRR----S 963

  Fly    72 GYGFGTGAGTLSMDNGSQFLRENGDVPSVRNGARLEPRAIARAPEGEGCPRCGGYV--YAAEQML 134
            ||.........:: :|.:..|...|.|...:..| .|...|.|.|....|...|..  .||:::.
 Frog   964 GYSQRKRPAMPAL-SGKEVTRTVEDTPDAEDQGR-APLLPAPAAEKTPGPSVNGVEDHSAAKRLR 1026

  Fly   135 ARGRSWHKECFKCGTCKKGLDSILCCEAPDK--------NIYCKGCYAKKFGPKGYGYGQGGGAL 191
            |.......|.::....|:.|:     |.|::        ::..||                    
 Frog  1027 ATPERIELENYRVSLQKEELE-----EVPEETLAEHNLSSLLDKG-------------------- 1066

  Fly   192 QSDCYAHDDGAPQIRAAIDVDKIQARPGEGCP--RCGGVVYAAEQKLSKGREWHKKCFNCKDCHK 254
            :.:..|......::....|.::.:..|||..|  ..|||.:....|:      |.|.        
 Frog  1067 EVEEVASSSSESEMEEEEDEEEEEEEPGECLPPSDLGGVPWKEAVKI------HAKL-------- 1117

  Fly   255 TLDSINASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLTEDQISANRPFYNPDTTSIKA 319
                    .|.|.||       :..|..|.|   ||...:.:...||:        ..:...:.:
 Frog  1118 --------KGQDIDV-------EVVGTQGAG---GSEEEEEEEEEEDE--------EEEDEEVSS 1156

  Fly   320 RDGEGCPRCGGAVFAAEQQLSKGKVW 345
            .:||.||        .|::|.:| :|
 Frog  1157 EEGEYCP--------WERELQQG-LW 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788 20/56 (36%)
LIM_CRP_like 120..173 CDD:188712 12/62 (19%)
LIM_CRP_like 222..275 CDD:188712 11/54 (20%)
LIM_CRP_like 325..378 CDD:188712 6/21 (29%)
LIM_CRP_like 421..474 CDD:188712
mical3XP_031754432.1 UbiH 87..>226 CDD:357568
CH_MICAL3 514..624 CDD:409100
LIM_Mical 904..958 CDD:188823 20/54 (37%)
PHA03247 1222..>1479 CDD:223021
Herpes_BLLF1 <1358..1622 CDD:282904
DUF3585 2055..2220 CDD:403377
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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