DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84B and GCP2

DIOPT Version :10

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_196181.1 Gene:GCP2 / 830445 AraportID:AT5G05620 Length:474 Species:Arabidopsis thaliana


Alignment Length:475 Identity:146/475 - (30%)
Similarity:249/475 - (52%) Gaps:35/475 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|::.|||.|.|||...|:..||||||..||.:....|.||  |..:.||.:.....::|||:
plant     3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRAL 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            .:||||.|::.::.|.||.|::.|.:.....  .|.||:|.|::. ||.:.:.::|.|.:.||..
plant    66 LIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGS 129

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|.|:..|.||....::::| ..:.|..||:||||:||...
plant   130 DSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ...::||..::||.|:..|....|.:..||:...|.|:..::|:.|.:||:.|.:|.||.....:
plant   195 LTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259

  Fly   259 LVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCM 317
            |:|.||.||.:..|.|: :..:.....:.:|.::.....:..|.||....|:     .||::...
plant   260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILN 324

  Fly   318 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 382
            :.:|:|.|..|:.::..|:.::.:.|:||.|...:|.::.:.|.|.....::.:     ||::.|
plant   325 IIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHT 384

  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL--------EKDYEEV 435
            :|...::|...::|.:..|:||:..|....|    :..||.|:|:.:.:|        ..||.:.
plant   385 SIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKW 449

  Fly   436 GMD------SGDGEGEGAEE 449
            ||:      :|:|...|..:
plant   450 GMEDPGQLMTGEGNASGVAD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 143/463 (31%)
GCP2NP_196181.1 PLN00222 1..454 CDD:215108 143/458 (31%)

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