DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84B and TUBE1

DIOPT Version :10

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_057346.1 Gene:TUBE1 / 51175 HGNCID:20775 Length:475 Species:Homo sapiens


Alignment Length:483 Identity:146/483 - (30%)
Similarity:239/483 - (49%) Gaps:74/483 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSE-----TGAGK 60
            |.:.:.:.|||.|.|||...|:|...||.        :....|..|::.::||..     .|.|.
Human     1 MTQSVVVQVGQCGNQIGCCFWDLALREHA--------AVNQKGIYDEAISSFFRNVDTRVVGDGG 57

  Fly    61 HV---------PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD 116
            .:         .|||.:|:|..||:|:..|..|.:|..:||||....:.||:|.||...|....|
Human    58 SISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKVFGSLYQD 122

  Fly   117 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 181
            .:|::.||.|:.|..||.|.|.||.|||||||..:.|::.|..::.:..:...:|||:.: ...:
Human   123 QILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE-DDVI 186

  Fly   182 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI--------------------------- 219
            ..||||||......||:||...:||::::||..: :|:                           
Human   187 TSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKLGTTVKPKSLVTSSSGALKKQ 250

  Fly   220 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF------PLVTYAPVISA 278
            .:..:..:|.::..::.::|:|.||:|:||:||.|...||||:|::|:      ||.|...|...
Human   251 HKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIP 315

  Fly   279 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 343
            .:...:..|.|      |...:|:::.||:|..|:||.::.||:|...|:...|..:|.  ::||
Human   316 PRRLDQMFSDA------FSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIERLKP--SLQF 372

  Fly   344 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 408
            |.|...|:|..:...||.    |.    ..::..|:|.|.:...:..|..:|..:|.|:|.:|.|
Human   373 VSWNQEGWKTSLCSVPPV----GH----SHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHY 429

  Fly   409 VG-EGMEEGEFSEAREDLAALEKDYEEV 435
            :. |||||..|:||...|:||.::|:::
Human   430 LQVEGMEESCFTEAVSSLSALIQEYDQL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 146/483 (30%)
TUBE1NP_057346.1 epsilon_tubulin 2..457 CDD:276959 145/480 (30%)

Return to query results.
Submit another query.